Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3006 |
Symbol | |
ID | 5209974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3773051 |
End bp | 3775498 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640596598 |
Product | ATP-dependent protease-like protein |
Protein accession | YP_001277320 |
Protein GI | 148657115 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACAG AACTTCCGCC TGAACGGTTG CGTCGCACGT TCGATCCTGC GCAGATTACC CTTCCTGCGA CTGAAGCGCC GCCAGGCGAC AGCGGCATCA TCGGTCAGCA GCGCGCGGTC GCCGCACTGC GCTTTGGTCT CAATATGGTC GATGGCGGCT TCAATATCTA CGCCGCCGGT CCGCCCGGCA TCGGTAAAAT GACCGCTGTT CAGGCATTTA TCGAAGAACT GGCGCAGCGT CGCCCAACGC CGTCGGACTG GTGCTATGTC AACGATTTCG ACGATCCCTA CCAGCCAAGG GCGTTGCGTT TGCCACCCGG TCGTGGGCGA CGCTTGCAGC AGGATGTGCA TATGATGATC GCGCATCTGC GTGCAGAATT GCCGCGCGCG TTCGAGAGCG ATGAGTATGC GGCGCGGCGG GATGAGGTGC TGCAGCAACT CAACTCCCGG CGTGAAGAAT TGCTCAGTCA GATCAGCGAA CGCGCTGCAC GGCAGGGGTT TGTCTTACAA GCCGGTCCGG TCGGCATCAT GATTATCCCA ATCCTCAACG GCGAGCCGTT GAGTGATGCT GCATTTCAGG CAATGACGCC GGAACAGCGT GAAGAGTTGC TGCGTCGTCG CGCCATGCTC CAGGACGAAC TCAAGCAGGT GATGAAACAG GTGCGCGCTG CGGAGCGGGT TGCGCGCCAG CGTATGGAAG AGATTGATCG TCAGGTCGTC GAGTATATCG TCGGCGGGTT GATCGACGAC TTGCAGGAAC AGTACGCCGA TCTGCCGGAG GTGGTAGCGT TTCTGGAAGC GGTTCAGAAG GATATCCAGG AGAATCCCGA TCCCTTCCGT TCCGGCGGTC AGCAGCAACC GTCGGGCGAG GCGCAGGTCG ATCTGGCATC GGTCCCATGG CTCAAAGAAT TGCCGTTCCG CAAGTATCAG GTGAATGTCC TGATCGATAA CAGTCGTCAG CAGGGCGCGC CGGTCGTTGT CGAATACAAC CCGACCTATC CCAACCTGTT CGGGCGTATC GAGAAGGAAA CCCACTTTGG CGCACTGTAC ACCGACTTTC TCATGATCAA ACCCGGCAGC CTGCACCGCG CCAATGGCGG CTTTCTGGTC ATCGAGGCGG AAGACCTGCT GCGCGACTAT TTCAGTTGGG ATGGTCTCAA ACGCGCGCTG CGCACCCGCG AGATTCAGAT CGAAGAACTC GCCGACCGGC TGGGTCTCAC AACCGTCAAG AGTCTGCGCC CGCAACCCAT ACCGCTCGAA CTCAAAGTTA TACTGGTGGG ACCGCCGCCA CCGTACTATT TGCTCGCCGC CTATGATGAT GAGTTCTCGA CCCTGTTCAA GGTCAAAGCC GATTTTGACA TCAGCATGCC GCTGAATGCG GAGAACCTGC ACGGTTCGCT CCACCTGTTC CGGCGCTTTT GCGAGCGCGA GGGTCTGCTG TCAATCTCCA ATGACGCAGC CGCGCGTCTG CTGGAGCACT CGTTGCGGCT TGCCGAGGAT CAGGAGCGTC TTTCGACCCA TTTCGGCGCG CTGACCGATG TGGTGCGCGA GGCGAATTAC TGGGCGTGCC AGGAGGGGTG CGACGCAATT CTGGAACGGC ACGTTACGCG CGCGTTGGAG GAGAAGGTCT ACCGTTCGAA CATGATCCAG GCGCGCATCC AGGAATTGAT CGACCGTGGC ATCATTTTGA TCGATACCGA AGGCGCAAAA ATTGGCCAGA TCAACGGATT GTCGGTTCTG AGCCTGGGGG ACTATACGTT TGGCAGACCG AGCCGTATCA GCGTCAGTGT GGGACCGGGG CGTGGGTCGA TCCTCGACAT CGAGCGCGAA GTGAAACTCG GCGGACCGAT CCACAGCAAA GGGGTGCTCA TTCTCAGCGG CTACCTGGCG GATCGGTACG GTCAGGAGCG ACCACTGACC CTTTCAGCGC GGCTGGTCTT CGAGCAGAGT TACGAGGGGG TCGAGGGCGA CAGTGCATCG GCGGCGGAGT TGTTCGCCCT GCTTTCGGCG CTGGCAGAAC TGCCGTTACG CCAGGGCATC GCAGTGACCG GCTCGGTCAA CCAGCGTGGC GAAATCCAGG CAGTTGGCGG GGTGAACCAG AAGATCGAGG GGTTTTTCGA TGTCTGTCGT CTGCGTGGGC TGACCGGCGA ACAGGGGGTG CTCATTCCGC AGGCGAATGT TCAGAACCTG ATGCTGCGCG GTGATGTGGT GGAAGCGGTG CGTGAAGGGC AGTTCCATAT CTGGACGGCG CTGACCATCG ATGAAGGCAT TGCACTGCTG ACCGGCGTGC CAGCCGGTGA GCGCGATGCA AACGGCGAAT ACCCGCCGGA GAGCGTCAAC GGACGGGTCA TGACGCGACT GCGCGCCTTC GCCGAGCGTC TCCGCGAGGG CGGAAAGACC AACGAGAGCG ACAAACGACG CGAGGGGGAG CAAAACGCCC AAGGGTAA
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Protein sequence | MATELPPERL RRTFDPAQIT LPATEAPPGD SGIIGQQRAV AALRFGLNMV DGGFNIYAAG PPGIGKMTAV QAFIEELAQR RPTPSDWCYV NDFDDPYQPR ALRLPPGRGR RLQQDVHMMI AHLRAELPRA FESDEYAARR DEVLQQLNSR REELLSQISE RAARQGFVLQ AGPVGIMIIP ILNGEPLSDA AFQAMTPEQR EELLRRRAML QDELKQVMKQ VRAAERVARQ RMEEIDRQVV EYIVGGLIDD LQEQYADLPE VVAFLEAVQK DIQENPDPFR SGGQQQPSGE AQVDLASVPW LKELPFRKYQ VNVLIDNSRQ QGAPVVVEYN PTYPNLFGRI EKETHFGALY TDFLMIKPGS LHRANGGFLV IEAEDLLRDY FSWDGLKRAL RTREIQIEEL ADRLGLTTVK SLRPQPIPLE LKVILVGPPP PYYLLAAYDD EFSTLFKVKA DFDISMPLNA ENLHGSLHLF RRFCEREGLL SISNDAAARL LEHSLRLAED QERLSTHFGA LTDVVREANY WACQEGCDAI LERHVTRALE EKVYRSNMIQ ARIQELIDRG IILIDTEGAK IGQINGLSVL SLGDYTFGRP SRISVSVGPG RGSILDIERE VKLGGPIHSK GVLILSGYLA DRYGQERPLT LSARLVFEQS YEGVEGDSAS AAELFALLSA LAELPLRQGI AVTGSVNQRG EIQAVGGVNQ KIEGFFDVCR LRGLTGEQGV LIPQANVQNL MLRGDVVEAV REGQFHIWTA LTIDEGIALL TGVPAGERDA NGEYPPESVN GRVMTRLRAF AERLREGGKT NESDKRREGE QNAQG
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