| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3000 |
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| Symbol | |
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| ID | 5209968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3765637 |
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| End bp | 3767259 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640596592 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain N |
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| Protein accession | YP_001277314 |
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| Protein GI | 148657109 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.744307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTCC AGATCACCGA TATCCCGCGT ATTCTTCCGG AGTTGATGCT CCTGCTGCTG
GGGTTGCTGG TGCTCGGTTC CGATATTCTG ACGCGCTGGG GGCGCGGCGC ACAGGCGCAG
GCTGAACGCG CCAGAGAAGC CGGTCAACTG ACCGCTGTCG GTCTGGGGCT GGTATTCATC
GTGGGGTTGG TGCAGAGCCG CTTCCTCTTC ACCGTCCCTG ATCCGACCGG CGGACCGCTG
GACGTTCTGC TGACGCTGGG GCGCAATCTT CAGGCGGGCG GTCCGGGAGG ATCGCCGGTG
TTGGGCGCGT TCGCAACCGA TGAGTTCACC ACGGTAGCGC GCCTGACCTT CATCGGCGCA
GCGTTGCTGA CGTCGCTGCT GGCGATGGGG TATCGGTTGA CCGCCAATCC TGGCGAGTTC
TATTCGTTGC TTATCTTCTC GACCCTGGGG ATGTCGATCA TGGCAGCGGC GACGGAGTTC
ATTCTGGCGT ATCTGGCGCT GGAACTGTCG TCGATTGCGC TCTATGTGCT TGCCGGATAC
TTCCGCGAAA GTGAACGCTC GCCAGAAGCC GGGTTGAAAT ACTTCCTGTT TGGATCGCTC
TCCTCGGCGA TTTTCCTGTA CGGCATCAGC CTGACCTACG GCTTCGTCGC CAGTGAGAAT
CAGAAAGCCG GCGGCACGCC GATCATCGCC ACGCTCTTTT CGGAAGTCGG GCGATTTGCA
ACCGGTGACG CCGCGCGCAG CCCGCTATTG ATCCTTGGCA TACTGTTCGT GATCGCCGGA
TTGGGGTACA AGATTTCGGT CGTGCCGTTC CACACATGGG CGCCGGATGT GTATCAGGGA
GCGCCGCCAC CGGTGACTGC CTTCCTTTCG ACGGCATCGA AAGCAGCCGG GTTCCTGCTG
CTCTACCGGT TGCTGACGAC GGCGTTCCCA GGGGCGGTTG GAACGCCGCG CCTGGAAGAA
TTCAGCGGCT GGACGAGCGT GCTGGCGATC CTGGCGCTGG TGACGGTGCT GGTAGGGAAT
CTGGCAGCGC TGCCGCAGAC CAATGCGCGC CGTCTGCTGG CGTACTCATC GATCGGGCAT
GCCGGTTTTC TGTTGCTCGC CGTGCTGCTC TGGTCATCGA CATCACCGGT TGATCGGACA
TTCGGCACGT CAGCGCTGAT CTACTACCTG ATCGTCTACA CGCTCACCAA TCTGGGCAGT
TTCGGTGTGC TGGCGGTGCT GACCAGGGCG CTGGGCAGTG ATGACCTGAG TGCCATGCAG
GGTCTGTGGC GACGCAATAT GCCGCTGACC TTAATGATGA CGATCCTGAT CCTGTCACTT
GCAGGCATTC CGCCACTCGC CGGTTTCTGG GCGAAGTTCT TTGTCTTTAT GGCGGGCTAC
CAGGCAGGCG CCGTTCCGCT GGTGACCGTC GCCGTTGTGA TGACGGTCGT CAGTCTGTAT
TACTATCTGC GTTTTCTCAA GGCGATGTGG ATTTTGCCAG CGCCGTCAAC GACGCCTTTC
TCGACACCGC CGGTTGCGAA TGCTGCCATC ATCGTATCAA CGGTGCTGGT GGTGCTGCTC
GGTTTGCTGC CGAACCTGAT CTGGGGGACG ATCAGCAGCG CAGCGAGTGT TGCGGCGCGT
TAG
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| Protein sequence | MSFQITDIPR ILPELMLLLL GLLVLGSDIL TRWGRGAQAQ AERAREAGQL TAVGLGLVFI
VGLVQSRFLF TVPDPTGGPL DVLLTLGRNL QAGGPGGSPV LGAFATDEFT TVARLTFIGA
ALLTSLLAMG YRLTANPGEF YSLLIFSTLG MSIMAAATEF ILAYLALELS SIALYVLAGY
FRESERSPEA GLKYFLFGSL SSAIFLYGIS LTYGFVASEN QKAGGTPIIA TLFSEVGRFA
TGDAARSPLL ILGILFVIAG LGYKISVVPF HTWAPDVYQG APPPVTAFLS TASKAAGFLL
LYRLLTTAFP GAVGTPRLEE FSGWTSVLAI LALVTVLVGN LAALPQTNAR RLLAYSSIGH
AGFLLLAVLL WSSTSPVDRT FGTSALIYYL IVYTLTNLGS FGVLAVLTRA LGSDDLSAMQ
GLWRRNMPLT LMMTILILSL AGIPPLAGFW AKFFVFMAGY QAGAVPLVTV AVVMTVVSLY
YYLRFLKAMW ILPAPSTTPF STPPVANAAI IVSTVLVVLL GLLPNLIWGT ISSAASVAAR
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