Gene RoseRS_2993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2993 
Symbol 
ID5209961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3755930 
End bp3757252 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content62% 
IMG OID640596585 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001277307 
Protein GI148657102 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACAG AAACAGAGCC AGAGACAACC GAAACCCAGA CAACACGCGG TAAGGTGTAC 
GTTATCGACC GCGGACGGCC AAAATTGCGC GCCGGGCAGG GGTTGCTGAC CGGTCTCGAT
GTTGTGTTTC GCCATTTTCG CGATGCGTTG ACGCGCAAAC TGGAGAAACC AAGCCAGCAA
ACCGGCGTTT TTACCGTTCA GTATCCCGAA GAGCGTTTGA AACTGCCCGA AGCGTTTCGC
AATTTCCCGA TCTTGCTCTA CGATGACGAA ACCGGTCATG AGTTGTGTAC GTCGTGTTTC
CAGTGTCAAC GCATCTGTCC GCCCCAGGTC ATTCATATGA CCCAGGCGCG CGATCCGGCG
ACCGGCAAGG CAGTCCCGGC AGTCGCCGAG TTTCTGATCG AGTATGATGC GTGCATGAGT
TGCGGTCTGT GCGCTGAAGT CTGCCCATTC GACGCGATCA AAATGGATCA TGAGTTCGAG
TTCTCAACCG ATGTGCACGG CGGGTTGACG ATCAATAAGG CGGGATTGAA CCGTCCTATT
TCGTACTACG AAAAGATTGC GCCGACGTTC TGGGCAGAGG TGAAGGACGG CGCGATGAAG
AAGTTGCAGG GCAACATGAA GCGCCGCCCC GACCTGATCG GTGTTGCGCC GCAGATGATC
GACACGATCA AGGCAAAGCG CGCCGAAGCC GCCGTTGCTC AGGCGCCCGC CCCTGCTCCC
TCAGCGCCCG ACAGCGCGCC AACCGACAAA GCGGCCCGCC TGGCTGCTAT TCGCGCAAAG
GCGGCAGCAA AGGATGCTGA AGCGCAGCCT GCACCATCGG ACGACAGCGC GCCAACCGAC
AAAGCGGCCC GCCTGGCGGC TATTCGCGCT GCCAACGCCG CCAGGAAAGA CGAAGCGGCG
GATGTGGCGC AAACGTCTGA TACCACGCCC GACGACAAAG CGGCTCGCCT GGCGGCCATT
CGCGCTGCCA ATGCCGCCAA AAAGGCGACG GCTGAAGGCG CACCCGCGTC GGCATCCGCC
GCACCGGCTG CCCACGCCGC GCCGACATCC GATACGCCGC CCGCCGCCAG CAGCACGCCC
GACGACAAAG CCGCCCGCCT GGCGGCCATT CGCGCTGCCA ATGCCGCCAA AAAGGCGGCG
GCTGAAGGCG CACCCGCGTC GGCATCCGCC GCACTGCCTA CCCACACCGC GCCGACATCC
GACACGCCGC CCGCCGCCAG CAGCACGCCC GACGACAAAT CCGCCCGCCT GGCCGCCATC
CGCGCTGCCA ATGCCGCCAA AAAAGCCGCT GCTCAAAAGC AAGACGGAAA TGACGATCAA
TAG
 
Protein sequence
MITETEPETT ETQTTRGKVY VIDRGRPKLR AGQGLLTGLD VVFRHFRDAL TRKLEKPSQQ 
TGVFTVQYPE ERLKLPEAFR NFPILLYDDE TGHELCTSCF QCQRICPPQV IHMTQARDPA
TGKAVPAVAE FLIEYDACMS CGLCAEVCPF DAIKMDHEFE FSTDVHGGLT INKAGLNRPI
SYYEKIAPTF WAEVKDGAMK KLQGNMKRRP DLIGVAPQMI DTIKAKRAEA AVAQAPAPAP
SAPDSAPTDK AARLAAIRAK AAAKDAEAQP APSDDSAPTD KAARLAAIRA ANAARKDEAA
DVAQTSDTTP DDKAARLAAI RAANAAKKAT AEGAPASASA APAAHAAPTS DTPPAASSTP
DDKAARLAAI RAANAAKKAA AEGAPASASA ALPTHTAPTS DTPPAASSTP DDKSARLAAI
RAANAAKKAA AQKQDGNDDQ