Gene RoseRS_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2978 
Symbol 
ID5209946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3729872 
End bp3730669 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content58% 
IMG OID640596570 
ProductABC transporter related 
Protein accessionYP_001277292 
Protein GI148657087 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTCC TGGAAGCACA ACATATTACC AAGCAGTTCG GTGGACTTAC TGCGGTCAAC 
GATGTGTCGC TCACCATCGA AGCGGGCAGT ATTGTGAGCG TTATCGGTCC TAACGGTGCG
GGAAAAACGA CGTTCTTCAA TGTGTTGACC GGGATCTACA AGCCGACCAA AGGGACGATC
ATCTTCGATG GTAAGGATAT TACCGGTCTG CGTCCCGACC AGATCACGGC GCTGGGGATC
TGTCGCACAT TCCAGAATAT CCGCCTGTTC AACGCAATGA CCGTGCTCGA AAACGTTCAG
GTCGGGATGC ACACGCGATT GAATGCCGGA TTGTGGCAGA TCATCTTTGG CACCCCCTCT
GTCCGTGCCG AGGAGAAGGC ATCGCTCGAA CGGGCGCGCG AGTTGCTCCG ATTCGTCAAC
CTGGACGACC AGCGTAACCA GCTGGCGCGC AATCTGCCCT ACGGTGATCA GCGCCGCCTT
GAAATTGCGC GGGCACTGGC ATCTTCACCA AAACTGATCC TGCTGGATGA GCCGACCGCC
GGCATGAATC CGCAGGAAAC AGCCGAAGCG ACCGATCTGA TCCGTCGGCT GCGCGATGAA
CTGGGAATCA CGGTAGTGCT CATCGAGCAC GATATGCGGG TGGTGATGAC CATCTCGGAA
CGCATTACCG TGCTCGACTA TGGCACCAAA ATTGCGGAGG GTCTTCCCCA CGAGATCCGT
TCCAACCCGC GCGTGATCGA AGCCTACCTG GGCAAAGGCG CCGCTGCGCA CGGAATGGTG
AAGGTTGAAG GTGGGTGA
 
Protein sequence
MALLEAQHIT KQFGGLTAVN DVSLTIEAGS IVSVIGPNGA GKTTFFNVLT GIYKPTKGTI 
IFDGKDITGL RPDQITALGI CRTFQNIRLF NAMTVLENVQ VGMHTRLNAG LWQIIFGTPS
VRAEEKASLE RARELLRFVN LDDQRNQLAR NLPYGDQRRL EIARALASSP KLILLDEPTA
GMNPQETAEA TDLIRRLRDE LGITVVLIEH DMRVVMTISE RITVLDYGTK IAEGLPHEIR
SNPRVIEAYL GKGAAAHGMV KVEGG