Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2948 |
Symbol | |
ID | 5209916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3688872 |
End bp | 3690302 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640596541 |
Product | undecaprenyl-phosphate galactose phosphotransferase |
Protein accession | YP_001277263 |
Protein GI | 148657058 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCAGC GCTCATGGGT GGTGCGCACG CTGCTGATAC TGGCGCTGAT CGCCTGTGAT TCGCTGGCGC TCAATGGAGC GTTCGTCGGC GTCTATCTGT GGGCAGTTCG TGCCGATGCC GAGTTTGCAG CTTCGCTTGC CACCGTTGGT TCGACGACCT GGCTGATCAC GCTGTTGATC ATGAATGTTT CCATGGCTGT CGCTTTTGTG GGAAGCAGCC TGTACTCGTT GCGTCGCGGC GTATCGCGGG TGGATGAGTT CTTCAAGGTG ATCGTGACGG TTTCACTTGG AACATTTGCC ACCCTGATCA TCAACGCGAT GCAACCGCAG TTCGGACGTG ATCCACTTCC CTGGAACGAG CAGGTGCTGG TGAGTGGCTG GATCGGCGCA GTGGCGGGTG TGGTCGCGCT AAGGTGGGCG CACCGTTCGG TGCTGACGGC GCTGCGTCGG CGCGGGATCG ATGTGCGCCG TGTCATTATC GTCGGAACGC GCGATCCGGG GCGGGTGGTG CTCAATACCA TCCGACGCCA GCCCGAAATG GGGTATCACG TCGTCGGTTT TATTTCGAAC TCAACGCCGG TTGGCACGCT GGTCGAGGGG GTGCCGGTGC TTGGCAAACC GGCGGCGCTT GGTCGTGTGA TACGCGCAGC GCAGGCGGAT GAGGTCATCA TTGCGGTGTC AGGTCGAACG CCGGCAGAAG TGCTGGACCT CGTCACCCTC GCCGAGGATG AGTCGGTCGA GATTAAACTC TATCCCGACG CTTTTCAACT GATCACCAAT AACGATATTT CAATCGGCGA TGTGAGCGGC TTGCCCCTGA TCGGCATTCG CAACGTTGCA CTCGACAGTC CGATCAACCG GGCGCTTAAG CGCACGCTCG ATCTGGTGGT TGCGATCCTG GTATTGACCC TCAGTTCACC GGTCATGCTG CTGATCGCGC TGCTGATCAA ATTCGAGTCG CGCGGTCCGG TCTTCTTTGT GCAGGAGCGG GTTGGTCTGG ACGGGAAGCC GTTCCCGACC TTCAAGTTCC GCACGATGCG CGTCGATGCG CCGCTGATCG GCAACTGGAC GACGAAGGAC GATCCGCGGG TGACGACGCT TGGGCGCTTC CTGCGGCGCT ACAGTCTCGA TGAATTGCCG CAGTTCATCA ATGTTATTCG TGGGGAGATG AGCGTTGTCG GACCACGCCC GGAGCAACCG GTGTGGGTCG AGCGGTTCAG TCAGAGCATC CCGCGCTATA TGCGCCGCCA CAAGCAGAAG GCTGGCATTA CCGGATGGGC GCAGGTCAAC GGGTTGCGCG GCGATACCAG CATTGAGGAG CGCACCCGCT ACGATCTCTA CTATGTTGAA AACTGGTCAC TGCTATTTGA CATAAAAATT ATCATCAAGA CGGTTGTTGA TATCCTTTCA GGCAAAAATC GAGGGTACTG A
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Protein sequence | MRQRSWVVRT LLILALIACD SLALNGAFVG VYLWAVRADA EFAASLATVG STTWLITLLI MNVSMAVAFV GSSLYSLRRG VSRVDEFFKV IVTVSLGTFA TLIINAMQPQ FGRDPLPWNE QVLVSGWIGA VAGVVALRWA HRSVLTALRR RGIDVRRVII VGTRDPGRVV LNTIRRQPEM GYHVVGFISN STPVGTLVEG VPVLGKPAAL GRVIRAAQAD EVIIAVSGRT PAEVLDLVTL AEDESVEIKL YPDAFQLITN NDISIGDVSG LPLIGIRNVA LDSPINRALK RTLDLVVAIL VLTLSSPVML LIALLIKFES RGPVFFVQER VGLDGKPFPT FKFRTMRVDA PLIGNWTTKD DPRVTTLGRF LRRYSLDELP QFINVIRGEM SVVGPRPEQP VWVERFSQSI PRYMRRHKQK AGITGWAQVN GLRGDTSIEE RTRYDLYYVE NWSLLFDIKI IIKTVVDILS GKNRGY
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