| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2843 |
|---|
| Symbol | |
|---|
| ID | 5209812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 3548906 |
|---|
| End bp | 3549868 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640596440 |
|---|
| Product | transposase, IS111A/IS1328/IS1533 |
|---|
| Protein accession | YP_001277162 |
|---|
| Protein GI | 148656957 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCC GTGAGTCGCT CTTTATCGGC ATTGATGTCT CCAAACAGAC GCTGGATGTG
GCGTTTGGCG CCGACCCGCA CGCGCCACGC GAGACGATAC CGTCTACCGA CGAAGGTGTC
CAGCTCCTGG TCACGCGACT CCAGCGCCTG CAGCCGACCC TGATTGTGCT GGAGGCGACC
GGCGGGCTGG AGCGCATGGT GTTCGCCCAA CTGCTCCAGG CTGGCGTGCC GACGGCGCGG
GTGCAGCCAC GCCGCGTGCG CGCCCTGGCG CACGCGGAAG GACGCCAGGC GAAGACCGAC
CGCCTGGATG CCCGGTTGCT CGCCCGCTTT GCCGAACGGG TGCGCCCGCC GCACCACCAA
GCGACGGACG AGCAGCGCGC ATCCTTGCGC GACCTGCTGG TCCGGCGGGA GCAGGTGATT
CAGATGCGGA CGGCTGAGAT CAATCGGTTG ACGGCTGCCG CGCCGAACCT CCGTCCGGGC
ATCCAGCAGC ATATTGATTG GCTGGATCAG GAGATCCGTG CGCTTGAGCA GGAACTCGAC
AACGAGGCGG AGCGCACCGA CGAGGTGCGC CGGAAACGGG AGCTGCTCGA AAGCGTGCCC
GGCATCGGCG CGATCACCGC ACTGAACCTG CTGCTCCGCC TGCCCGAACT GGGGACCATC
AATCGCAAGG AAGCGGCGGC CTTTGTGGGC GTTGCGCCGT ATGCCAATCA GAGCGGCGCA
CAGCACAAAC CCCGGCATAT CTCCGGCGGC AGGAGGGATG TGCGCAGCGT GTTGTACATG
GCGACCCTGG CGGCCACGCG GCGCCGTCTG GTCAGGCGCG CCTTCGATCA GCGCCTGTGT
CAAGCTGGCA AGCCGCGCAA GGTCGCCATC GTCGCTGCGA TGCGCAAGCT GCTGACTATT
CTCGGCGCAA TATTGCGTCA GCAAAAGCCC TGGGATCCGG CTGTGCATAC GAGCGCCCCT
TGA
|
|---|
| Protein sequence | MASRESLFIG IDVSKQTLDV AFGADPHAPR ETIPSTDEGV QLLVTRLQRL QPTLIVLEAT
GGLERMVFAQ LLQAGVPTAR VQPRRVRALA HAEGRQAKTD RLDARLLARF AERVRPPHHQ
ATDEQRASLR DLLVRREQVI QMRTAEINRL TAAAPNLRPG IQQHIDWLDQ EIRALEQELD
NEAERTDEVR RKRELLESVP GIGAITALNL LLRLPELGTI NRKEAAAFVG VAPYANQSGA
QHKPRHISGG RRDVRSVLYM ATLAATRRRL VRRAFDQRLC QAGKPRKVAI VAAMRKLLTI
LGAILRQQKP WDPAVHTSAP
|
|---|
| |