Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2772 |
Symbol | |
ID | 5209741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3456432 |
End bp | 3457265 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640596372 |
Product | hypothetical protein |
Protein accession | YP_001277094 |
Protein GI | 148656889 |
COG category | [R] General function prediction only |
COG ID | [COG5564] Predicted TIM-barrel enzyme, possibly a dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00186592 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTCA CACGTGAGGA AATTCTCCAG CGCTTGCGCG CACAGATCGC TGCCGGTAAA CCGATTGTCG GCGCAGGCGC TGGTACAGGG ATTTCTGCCA AATTCGCAGA AGCAGGGGGC GCGGATATCA TTATCATCTA TAACTCAGGG CGCTATCGCA TGGCGGGACG GGGATCACTG GCAGGGCTGA TGCCGTATGG TGATGCGAAT GCCATTGTGG TTGAGATGGC AAACGAGGTG TTGCCGGTTG TGAAGCATAC GCCTGTGCTT GCGGGGGTGT GTGGCACCGA TCCGTTTCGC CTGATGCCGG TGTTTCTCAA GCAGTTGCGT GAGATTGGCT TTTCGGGCGT GCAGAACTTC CCCACCGTCG GGCTTATCGA CGGCAATTTC CGCGCGAACC TGGAAGCCAC CGGGATGGGA TACGACAAAG AGATCGAAAT GATCCATCTG GCGCACCAGA TGGACCTGTT TACGTCACCG TATGTGTTCG ATCCCGATCA GGCGCGCGAG ATGGTGCGCG CCGGCGCTGA TCAACTGGTG GCGCATGTCG GGTTGACCAC TTCAGGAAGC ATTGGCGCTG GCGTTGCTCT GACTCTCGAC GAAGCCATCG AGCGGGTGAT GGAGATCGCT GAGGCTGGCC GTCAGGTGCG ATCCGACATT ATTGTGATCT GTCACGGCGG ACCGTTCGAC GAACCCGAAC AGGTCGGCAT GGCACTGCGC CGCATGCCGG GGATTGCTGG ATTCTTCGGC GCTTCGAGCA TCGAGCGCCT GCCGACGGAA CGCGCCATCC GCGCGCAGGT CGAGGCGTTC AAGCATCTGA CTCTTGCCCG GTAA
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Protein sequence | MAFTREEILQ RLRAQIAAGK PIVGAGAGTG ISAKFAEAGG ADIIIIYNSG RYRMAGRGSL AGLMPYGDAN AIVVEMANEV LPVVKHTPVL AGVCGTDPFR LMPVFLKQLR EIGFSGVQNF PTVGLIDGNF RANLEATGMG YDKEIEMIHL AHQMDLFTSP YVFDPDQARE MVRAGADQLV AHVGLTTSGS IGAGVALTLD EAIERVMEIA EAGRQVRSDI IVICHGGPFD EPEQVGMALR RMPGIAGFFG ASSIERLPTE RAIRAQVEAF KHLTLAR
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