| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2762 |
|---|
| Symbol | |
|---|
| ID | 5209731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 3441388 |
|---|
| End bp | 3442431 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640596362 |
|---|
| Product | membrane lipoprotein lipid attachment site |
|---|
| Protein accession | YP_001277084 |
|---|
| Protein GI | 148656879 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGTC TGTCGCTACT CCTCGTGCTT CTGACCGCCC TGATCGGCGC CGGATGCGGC
GCGACGCCGG CGGCAACGCC GACGCCTGCC GCCGGACCCG GACAAACCGC GCCGACGGGG
CTGCGCCCGG TCATAATGGG CTTTCCGTAC ATTCCGAATG TTCAGTTCTC CCACTTTTAT
CTAGCGCATG CCAGGGGGTA CTATGCCGAC GAAGGGCTGG ACGTGACCTT CGACTACAAC
TTTGAGACCG ATGTCGTTCA GCGGGTGGCG CAGGGCACCC TGCAGTTCGC GCTGGCGTCG
GGCGACTCGG TGTTGCTGGC GCGTGCCCAG GGATTGCCGG TTGTCGCCGT GATGACCAAT
AGCCAGCGCT TTCCAACTGT CTTCTTCAGT AAAACCGAAG CGAATATCAC CACGCCGAAG
GACCTGACGC GCGACGGAGT GACCGTCGGT ATTCCCGGAC GCTTCGGCGC CAGCTGGATC
GGTCTGCTGG CGCTGCTGTA TGCAGAAAAC ATCCCGCGCG AAGCGGTGAA TGTCCAGGAG
ATCGGGTTCA CCCAGGTGGC GGCGATCAGC GAAGGGAAAG TCACGGTTGC CGCCGGGTAC
GGCAACAATG AGCCAATCCA GCTCGAACGG CAGGGCATAC CGGTGAACGT CATCCGTGTT
TCCGATTACT TCCCGCTCGC TTCCGACAGT GTGATTGCGA GCGAGCAGTT GATCGGCAGC
AATCCGGATG TTGTGCGCCG CTTCGTGCGC GCAACACTGC GCGCCATGGC GGAAGTCATC
GCCGATCCCG ACACAGCCTT TACCGTTGCG CTCGATTACA TTCCCGAACT CAAGAGCGCC
GATCAGCCCA CCCGCGATCT GCAACGCGCC GTGCTCCAGG CAACGCTGGA TTACTGGCAG
AGCGACAAAA CCAAAACCGA GGGGCTGGGT TTCTGCGACG AAGCGAACTG GCGTGAAACC
CACACCTTTC TGCGCGAAAG CGGACTGCTG ACGACCGATG TGGACGTGAT GAAAGCGTTC
ACGAACCAGT TTCTCAAGGA TTGA
|
|---|
| Protein sequence | MRRLSLLLVL LTALIGAGCG ATPAATPTPA AGPGQTAPTG LRPVIMGFPY IPNVQFSHFY
LAHARGYYAD EGLDVTFDYN FETDVVQRVA QGTLQFALAS GDSVLLARAQ GLPVVAVMTN
SQRFPTVFFS KTEANITTPK DLTRDGVTVG IPGRFGASWI GLLALLYAEN IPREAVNVQE
IGFTQVAAIS EGKVTVAAGY GNNEPIQLER QGIPVNVIRV SDYFPLASDS VIASEQLIGS
NPDVVRRFVR ATLRAMAEVI ADPDTAFTVA LDYIPELKSA DQPTRDLQRA VLQATLDYWQ
SDKTKTEGLG FCDEANWRET HTFLRESGLL TTDVDVMKAF TNQFLKD
|
|---|
| |