Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2758 |
Symbol | |
ID | 5209727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3437685 |
End bp | 3438353 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640596358 |
Product | deoxyribonuclease V |
Protein accession | YP_001277080 |
Protein GI | 148656875 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCAAT CATTCGACCA ACCGTGGCCC ACAAGCCTGG CAGAGGCACG GGCCATTCAG CAACACATAC GCACACGAAT CATTACCCAC GATGCCCACG GACCGATCCG CACGGTTGCC GGTGTCGATA CCGGGTACAG TGGTGATAGC GCGCTCGCAG CCGTTGTCGT GCTGGCATTT CCGTCGCTGG AGGTGCTCGA TTATGCAGTG GCGCGACGGC AGATCGACTT CCCGTATGTC CCTGGCTACC TTTCGTTCCG TGAAGCGCCC GCAGTGCTCG ATGCGCTTGC CAGCCTGCGC ATTGCGCCTG ATCTGCTGAT CTGTGACGGC CACGGTCTTG CCCATCCCAG GCGTTGCGGT ATTGCTTCCC ATCTTGGCGT CCTCACCGAT CTCCCCTCGA TCGGATGCGC AAAATCGTTG CTGGTCGGCA CGCACGAACC ACCGCCCGAT GTGCGTGGCG CCTGGACGCC GCTGCACGAC CAGGGGGAAG TTGTCGGAGC AGCGCTGCGC ACCCGTCCGG GAGTGCGCCC GGTGTACGTT TCCATTGGTC ATCGCGTGGC GCTGGAGACG GCGATCCGCT TCGTGATGGC GTGTGTTACG CGCTATCGAC TGCCGGAGAC GACCCGCGCC GCTGATGCGC TTGCGTCGCA TGGGCGCATC CCACGATAA
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Protein sequence | MDQSFDQPWP TSLAEARAIQ QHIRTRIITH DAHGPIRTVA GVDTGYSGDS ALAAVVVLAF PSLEVLDYAV ARRQIDFPYV PGYLSFREAP AVLDALASLR IAPDLLICDG HGLAHPRRCG IASHLGVLTD LPSIGCAKSL LVGTHEPPPD VRGAWTPLHD QGEVVGAALR TRPGVRPVYV SIGHRVALET AIRFVMACVT RYRLPETTRA ADALASHGRI PR
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