| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2755 |
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| Symbol | |
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| ID | 5209724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3434336 |
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| End bp | 3436348 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640596355 |
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| Product | VanW family protein |
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| Protein accession | YP_001277077 |
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| Protein GI | 148656872 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.251322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGCTG AACAGGTTCA CTTTTCGTCG GTAGCCGATG CGGCGGAGCG TGAAGGTTTT
CCGGTCACAG CACGTACACG CGTGCGACCG CCGCGCCGTC GTGGTGATGG GTGGCTCTGG
TTTGCACTGG CAGTGATTAC GCTTGTCGCA CTGGGCGTTG CAGGCGGGAT CACGTCCTTC
TACCGGTCAT ACGAAGGGCG GATCTATCCC AATGTTTCGA TCCAGGGCAT TGCCGTTGGC
GAAATGACGC CCGAACAGGC CGAGTCTGCG CTGCGCTCGC GCTATGCGGC ATTCCTCCGT
CAACCGGTGG TCATTACGTA TGGTGACCGT CAGTGGACGC CGACGCTTGA CGAGTTGGGG
ATGACATTCG ATTTTCGTGG CGCGGTCGAT GCGGCATACA ATGCCGGTCG TGGTCGTGGA
GTGGTCGATG ACGTCCGTGA ACTTGCCGCG ATATGGCAGC ACGGTCTCGA TGTACCGCTG
CACGTGTCCT ACGATGAAAC GCGCGCGCAG GCATACCTGA CGCAACTGGC GCGTGAGATC
GAGCGTGCGC CCGCCGATGC GCAGGTACGA CTCGATGGCG CACAGATTGC GATTGTTGGC
GCTGTCATTG GGCGGCAGGT GCTGGTCGAC GCAACCCTGG CGCACGTGTC GCAGCAGTTA
CAAGCCTTCG TTCCCGCCAC GATCCCGTTG CAAACCCGCG AGATCCCGCC CCGCCTCGAC
GATGCCACCG TCGCTGCGGC GCGTGCGCAG ATCGAAACCA TCCTGCAAGG TCCGTTGACA
TTGCGGGTGG GTAAGAATGA GTATGAGTGG ACGGTCGCCG ATCTTGCGGA CATGATCATC
ATAAACCGTG TTCCTTCCGC AGAAGGGGAC CGTATCGCGG TGACCCTCGA CCAGGACATG
ATCGCGCGCC GTATTCGCCA GATTGCCGAC GAGACGGAAA AACCGGGAAC GCGACCACGG
GTGGCATGGA ACAACGGGGA TCTCAAGATC ATAAAGCCCG GCAAGCCGGG GCTGCGCCTC
GACGAAGTGC GCGCGCGCGA TATGGTGATC GCCGCAGTGA TGGGGCGTGA TCGAACGCTC
GAACTGCCAA TGGTTCCTAC CGATCCGCCG GTGACTGAAG CAAACCTCCA TCAACTTGGC
ATTCGTGAAC TGGTCAGCAT TGGCAAAAGC GACTTTACCG GCTCAGCAGC CTATCGCATC
CACAATATCG GCGTTGGGAT GCAACTGCTG AACGGTTTGT TGATTGCGCC AGGCGAGGAG
TTTTCCTTCA ATAAGAATAT CGGGCAGATC AACGCGGCCA ATGGGTTCGT CGAAGGCGCG
GCTATTATTC AGAACCGGAC GCAACAGGAG TTCGGCGGCG GCATCTGCCA GGACTCAACG
ACCCTGTTCC GCGCTGCATT CTGGGCCGGA TTACCGATTA CCGAGCGATG GGGGCACTCG
TTCTATATCA GCTGGTACGA CAAGTACGCG CTTGGTCCTC GCGGCAACGG TCCTGGACTC
GATGCCACCA TCTTCACCGG CGGACCAGAC CTGAAGTTTA TCAACGACAC CGGTGCGTGG
CTGTTGATCC AGGCATGGTC AAACCCGAAG ACCGGTGTGG CGCAGATTGA GCTATACGGC
ACGAAGCCCA ATCGCACGGT CGATCTGACG CATAAAGTGT ACGATCACAC GCCTGCACCC
TCGGAACCGG TATTCGTCGC CGATCCGAAA GTGCCACGCG GAACGATCAA ACATACCGAT
AAAGCACGCG GTGGTATGAC GATAGATGTG TATCGTCTGG TTGTGGAAAA TGGCGCTCCG
CGCCCGCCGG AGTTGTTCCG CACCCGTTTT CGCCCGTGGC CTAACATCTA TACCCTGAAC
CCTGCCGATA TCGGTCCCGA CGGTAAGCCG CTGATTCCGT TCCCACAGGG CGATCAACCG
GCGCCCACAC CCGCGCCGCC GCCAGAACAA CCGACCGAAC CGCCACCACC GCCGGGTGTT
GAACCCGCCA CCGGTAATCA GATAAACCCG TAA
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| Protein sequence | MSAEQVHFSS VADAAEREGF PVTARTRVRP PRRRGDGWLW FALAVITLVA LGVAGGITSF
YRSYEGRIYP NVSIQGIAVG EMTPEQAESA LRSRYAAFLR QPVVITYGDR QWTPTLDELG
MTFDFRGAVD AAYNAGRGRG VVDDVRELAA IWQHGLDVPL HVSYDETRAQ AYLTQLAREI
ERAPADAQVR LDGAQIAIVG AVIGRQVLVD ATLAHVSQQL QAFVPATIPL QTREIPPRLD
DATVAAARAQ IETILQGPLT LRVGKNEYEW TVADLADMII INRVPSAEGD RIAVTLDQDM
IARRIRQIAD ETEKPGTRPR VAWNNGDLKI IKPGKPGLRL DEVRARDMVI AAVMGRDRTL
ELPMVPTDPP VTEANLHQLG IRELVSIGKS DFTGSAAYRI HNIGVGMQLL NGLLIAPGEE
FSFNKNIGQI NAANGFVEGA AIIQNRTQQE FGGGICQDST TLFRAAFWAG LPITERWGHS
FYISWYDKYA LGPRGNGPGL DATIFTGGPD LKFINDTGAW LLIQAWSNPK TGVAQIELYG
TKPNRTVDLT HKVYDHTPAP SEPVFVADPK VPRGTIKHTD KARGGMTIDV YRLVVENGAP
RPPELFRTRF RPWPNIYTLN PADIGPDGKP LIPFPQGDQP APTPAPPPEQ PTEPPPPPGV
EPATGNQINP
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