Gene RoseRS_2666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2666 
Symbol 
ID5209635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3312292 
End bp3313320 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content60% 
IMG OID640596268 
ProductABC transporter related 
Protein accessionYP_001276990 
Protein GI148656785 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTAA TTGCAATCGA GGATGTCCAC AAATCATACG ACGGCATACC TGTACTGCGC 
GGTGTATCGT TGCACGTGCC GCGCGGCATT GTCTACGGGG TGCTGGGTCC GAACGGCGCA
GGGAAGACGA CCCTGATCCA TCTGCTGGTC GGCTTTCTGC GCCCAGACCG CGGCATCATT
CGTATGTTCG GCGACGAGAA CCTGCGCCAG GTCGATGGGC GCGTTGGGTA TATGCCGGAA
CGGTTGCGCT ATCATACGCA CTACACCGTG CGCGAGTATC TCTTCTACCT GGGGCGGTTC
AGCGGACTTG CCGGCGCAGC GCTGCGCAGG CGAGTTGGCG AGGAGATCGA GGCGTGTGGT
TTGACCAGCG TCGTCAACCG GAAGATGAGC GCCCTCGCGC GCGGGATGGT GCAGCGTGTC
GGTTTTGCGC AGGCGCTGCT CAGTCAACCG GAACTGCTCT TGATCGATGA ACCAACGTCT
GGACTCGACT CAGAAGGGCA ACGCGACATT ATCGATCTGA TCGATACGGT TCGCCAGCGT
AGATGTACGA TCATGATAGC GACGCATTTT CTCGATGAGG TGGATCTCTT ATGTGATCGT
TTTGGCATTC TGCATGGCGG GCGTATCATC GCAGAGGCTG AAACGCGCAC GCTTCGCCAG
TCGTCGAGGA GTGTCGTGAT CACGGTCGCG GATCTGCCGC CTGACGCGGC GGCGGCGCTG
AGTGCGCTTT CCACTGCGGT GTGTTGCAAT CAGCGCGAAA TAACGTTGAC GCCGAACACG
CCGGAATTGC AGGCGCAGGT ATTGCGGCTG TTGCTCGACC ATGGGGTTTC CATCATCTCT
CTTGCACCGC GGTTTCACCC GATTGAGGAA TTCTACCGCA GCGCCGTGCG CGGCGAGGCG
GGTCGTCATG GAGAGTCCGA CGCATCTCCA CCGCCTCCAG GTCCATCAGG AACCGGCGAC
ACGTTGTTGC GCGAATTGCT GCGTTGGGAA GATCAACGAA CGCAGGAAAG GCAGGCAGAC
GAACCGTGA
 
Protein sequence
MDVIAIEDVH KSYDGIPVLR GVSLHVPRGI VYGVLGPNGA GKTTLIHLLV GFLRPDRGII 
RMFGDENLRQ VDGRVGYMPE RLRYHTHYTV REYLFYLGRF SGLAGAALRR RVGEEIEACG
LTSVVNRKMS ALARGMVQRV GFAQALLSQP ELLLIDEPTS GLDSEGQRDI IDLIDTVRQR
RCTIMIATHF LDEVDLLCDR FGILHGGRII AEAETRTLRQ SSRSVVITVA DLPPDAAAAL
SALSTAVCCN QREITLTPNT PELQAQVLRL LLDHGVSIIS LAPRFHPIEE FYRSAVRGEA
GRHGESDASP PPPGPSGTGD TLLRELLRWE DQRTQERQAD EP