Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2558 |
Symbol | |
ID | 5209527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3172301 |
End bp | 3173263 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640596162 |
Product | transposase, IS111A/IS1328/IS1533 |
Protein accession | YP_001276884 |
Protein GI | 148656679 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCCC GTGAGTCGCT CTTTATCGGC ATTGATGTCT CCAAACAGAC GCTGGATGTG GCGTTTGGCG CCGACCCGCA CGCGCCACTC GAGACGATAC CGTCTACCGA CGAAGGTGTC CAGCTCCTGG TCACGCGACT CCAGCGCCTG CAGCCGACCC TGATTGTGCT GGAGGCGACC GGCGGGCTGG AGCGCATGGT GTTCGCCCAA CTGCTCCAGG CTGGCGTGCC GACGGCGCGG GTGCAGCCAC GCCGCGTGCG CGCCCTGGCG CACGCGGAAG GACGCCAGGC GAAGACCGAC CGCCTGGATG CCCGGTTGCT CGCCCGCTTT GCCGAACGGG TGCGCCCGCC GCACCACCAA GCGACGGACG AGCAGCGCGC ATCCTTGCGC GACCTGCTGG TCCGGCGGGA GCAGGTGATT CAGATGCGGA CGGCTGAGAT CAATCGGTTG ACGGCTGCCG CGCCGAACCT CCGCCCGGGC ATCCAGAAGC ATATTGATTG GCTGGATCAG GAGATCCGTG CGCTTGAGCA GGAACGCGAC AACGAGGCGG AGCGCACCGA CGAGGTGCGC CGGAAACGGG AGCTGCGCGA AAGCGTGCCC GGCATCGGCG CGATCACCGC ACGGAACCTG CTGCTCCGCC TGCCCGAACT GGGGACCATC AATCGCAAGG AAGCGGCGGC CGTTGTGGGC GTTGCGCCGT ATGCCAATCA GAGCGGCGCA CAGCACAAAC CCCGGCATAG CTCCGGCGGC AGGAGGGATG TGCGCAGCGT GTTGTACATG GCGACCCTGG CGGCCACGCG GCGCCGTCTG GTCAGGCGCG CCTTCGATCA GCGCCTGTGT CAAGCTGGCA AGCCGCGCAA GGTCGCCATC GTCGCTGCGA TGCGCAAGCT GCTGACTATT CTCGGCGCAA TATTGCGTCA GCAAAAGCCC TGGGATCCGG CTGTGCATAC GAGCGCCCCT TGA
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Protein sequence | MASRESLFIG IDVSKQTLDV AFGADPHAPL ETIPSTDEGV QLLVTRLQRL QPTLIVLEAT GGLERMVFAQ LLQAGVPTAR VQPRRVRALA HAEGRQAKTD RLDARLLARF AERVRPPHHQ ATDEQRASLR DLLVRREQVI QMRTAEINRL TAAAPNLRPG IQKHIDWLDQ EIRALEQERD NEAERTDEVR RKRELRESVP GIGAITARNL LLRLPELGTI NRKEAAAVVG VAPYANQSGA QHKPRHSSGG RRDVRSVLYM ATLAATRRRL VRRAFDQRLC QAGKPRKVAI VAAMRKLLTI LGAILRQQKP WDPAVHTSAP
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