Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2553 |
Symbol | |
ID | 5209522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3166091 |
End bp | 3166837 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640596157 |
Product | hypothetical protein |
Protein accession | YP_001276879 |
Protein GI | 148656674 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.346144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.522171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCTT CAACCGCAAC CGATCCGGCG GCGCCCCACA CCGAGACTCA ATTGCCGTGG GGGGTGCTGA TCTCGCCGCC GCCGGGCGAC CTGCCATACG ACGATGGAGG ACGTATGGAG TCGCCCTGGC ATGCGCACAG CGCCGTGATC CTCAAAGCCG CCTATGTTGC GGCGCATGGC GGCGTGATGA CCGACTACTA CATCGGCGTC AACATGTTCG TGTACTACAG CTGGAAGCAG ATCCGCAACG ACGAATACCG TGGCCCCGAT CTCTACGTCG TGAAAGGGGT GGACGGCACA AAGCCGCGGC TCTACTGGGC CATCTGGGAT GAGGACGGGC GGTATCCCGA TGTCATCGTC GAACTGTTGT CGCCAGGTAC AGAGAGCGTT GATCTTGGGG CGAAGAAGGA CCTGTACGAA CAGCGGTTTC GCACTCCTGA GTACTTTTGC ATTGCGCCGG AGGTCGAGCG TCTTCTGGGG TGGCGGTTGG GACCGGATAT GCGCTACCAT CCGCTGGCGC CGAACGAGCA TGGGCGGTTG TGGAGCGAGC AACTCGGTTT CTGGATCGGT CCGTGGCGAG GTGTGTATCT GGGAGAGGAG CATACCTGGC CGCGTCTGTT TCACGCCGAT GGTTCACTCG TGCTGCTGCC GGAAGAGGCG GAGCGACAGC GCGCCGAGGC GCTCGCCGCG CGGGTTGCGG CGCTCGAAGA GGAACTGGCG CGTCTGCGCA AAAGGAGCGA CCGATGA
|
Protein sequence | MSASTATDPA APHTETQLPW GVLISPPPGD LPYDDGGRME SPWHAHSAVI LKAAYVAAHG GVMTDYYIGV NMFVYYSWKQ IRNDEYRGPD LYVVKGVDGT KPRLYWAIWD EDGRYPDVIV ELLSPGTESV DLGAKKDLYE QRFRTPEYFC IAPEVERLLG WRLGPDMRYH PLAPNEHGRL WSEQLGFWIG PWRGVYLGEE HTWPRLFHAD GSLVLLPEEA ERQRAEALAA RVAALEEELA RLRKRSDR
|
| |