Gene RoseRS_2553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2553 
Symbol 
ID5209522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3166091 
End bp3166837 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content63% 
IMG OID640596157 
Producthypothetical protein 
Protein accessionYP_001276879 
Protein GI148656674 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.346144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.522171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTT CAACCGCAAC CGATCCGGCG GCGCCCCACA CCGAGACTCA ATTGCCGTGG 
GGGGTGCTGA TCTCGCCGCC GCCGGGCGAC CTGCCATACG ACGATGGAGG ACGTATGGAG
TCGCCCTGGC ATGCGCACAG CGCCGTGATC CTCAAAGCCG CCTATGTTGC GGCGCATGGC
GGCGTGATGA CCGACTACTA CATCGGCGTC AACATGTTCG TGTACTACAG CTGGAAGCAG
ATCCGCAACG ACGAATACCG TGGCCCCGAT CTCTACGTCG TGAAAGGGGT GGACGGCACA
AAGCCGCGGC TCTACTGGGC CATCTGGGAT GAGGACGGGC GGTATCCCGA TGTCATCGTC
GAACTGTTGT CGCCAGGTAC AGAGAGCGTT GATCTTGGGG CGAAGAAGGA CCTGTACGAA
CAGCGGTTTC GCACTCCTGA GTACTTTTGC ATTGCGCCGG AGGTCGAGCG TCTTCTGGGG
TGGCGGTTGG GACCGGATAT GCGCTACCAT CCGCTGGCGC CGAACGAGCA TGGGCGGTTG
TGGAGCGAGC AACTCGGTTT CTGGATCGGT CCGTGGCGAG GTGTGTATCT GGGAGAGGAG
CATACCTGGC CGCGTCTGTT TCACGCCGAT GGTTCACTCG TGCTGCTGCC GGAAGAGGCG
GAGCGACAGC GCGCCGAGGC GCTCGCCGCG CGGGTTGCGG CGCTCGAAGA GGAACTGGCG
CGTCTGCGCA AAAGGAGCGA CCGATGA
 
Protein sequence
MSASTATDPA APHTETQLPW GVLISPPPGD LPYDDGGRME SPWHAHSAVI LKAAYVAAHG 
GVMTDYYIGV NMFVYYSWKQ IRNDEYRGPD LYVVKGVDGT KPRLYWAIWD EDGRYPDVIV
ELLSPGTESV DLGAKKDLYE QRFRTPEYFC IAPEVERLLG WRLGPDMRYH PLAPNEHGRL
WSEQLGFWIG PWRGVYLGEE HTWPRLFHAD GSLVLLPEEA ERQRAEALAA RVAALEEELA
RLRKRSDR