Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2544 |
Symbol | |
ID | 5209513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3146547 |
End bp | 3147473 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640596148 |
Product | branched-chain amino acid aminotransferase |
Protein accession | YP_001276870 |
Protein GI | 148656665 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.106098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0975839 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCA ACCGCTTTGC TTTCTTCAAC GGCGAATTTG TTCCGATTGA GCAGGCGCAG GTCAGCGTGA TGACGGCTGC GCTGAACTAT GGTCTTGGCG TGTTCGAAGG CATTCGCGCC TACTGGAATG CGGACGACGC GCAACTCTAC GTGTTTCATC TGCGCGAACA TATGGAGCGC CTGAAGCGTT CATGCGCAAT TATGTTCATG GAACTGCCCT ACAGCGTCGA TGACCTGTGC AATCTGACCA TCGAACTCCT GCGACGCGAG GGATTTCGTG AGGACGCCTA CATCCGTCCG CTGGTCTTCA AAAGTGATCA CACGATTGCC GTTCGCCTCA ACAACATGAC TGACGCATTC GCGCTCTATG CCGTGCCCTT CGGACAGTAC ATTCCCGGAT CGGCGGTGCG CGCCTGCGTC TCTTCGTGGC GCCGCATCGA AGACAACATC ATGCCGTCGC GGGCGAAGGT GTCGGGCGGG TACGTCAATT CGGCGCTGGC GAAGACCGAG GCGCTGCTCA ACGGTTATGA CGAAGCGATT GTGCTCGGCA GCGATGGGCA GGTATCGGAG GCAAGCGCGG CGAACCTGTA TATTGTGCGT CATGGCGCAC TTGTCACCCC GCCGATCACC AGCGATATTC TGGAAGGGAT TACCCGTCGG GTCGTCGCAG AACTGGCGCA GGCGGAGTTG GGGGTGCAGG TGATCGAGCG ACCAATTGAC CGCACCGAAC TGTATGTTGC CGAAGAAGCA TTTTTCTGCG GCACCGGCGC CGAAGTCAAA CCGATTATCG AGATCGACCG GCGACCGGTC GGGAACGGTG AGGTTGGCAG CATAACGGCG CGTCTGGTGG AACTGTACAG CACCGTGGTG CGTGGTCAGG CGCCGACGTA TCGCGCCTGG TGCACACCGG TGTATGCTCA GCAATAA
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Protein sequence | MSANRFAFFN GEFVPIEQAQ VSVMTAALNY GLGVFEGIRA YWNADDAQLY VFHLREHMER LKRSCAIMFM ELPYSVDDLC NLTIELLRRE GFREDAYIRP LVFKSDHTIA VRLNNMTDAF ALYAVPFGQY IPGSAVRACV SSWRRIEDNI MPSRAKVSGG YVNSALAKTE ALLNGYDEAI VLGSDGQVSE ASAANLYIVR HGALVTPPIT SDILEGITRR VVAELAQAEL GVQVIERPID RTELYVAEEA FFCGTGAEVK PIIEIDRRPV GNGEVGSITA RLVELYSTVV RGQAPTYRAW CTPVYAQQ
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