| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2523 |
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| Symbol | |
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| ID | 5209492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3117819 |
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| End bp | 3118478 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640596128 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase |
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| Protein accession | YP_001276850 |
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| Protein GI | 148656645 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.181892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGACCGGAT TCGACATCCA CGCTGCGATG GCGATCCTGC GCGCCGAGAT GCCGCGTTTC
CCCAAGCCGC TGATCGACGG CATGGGCGAG GAAGAGGCGC GTAACCCGTT TCGTATTTTG
ATCGCCACGA TCCTGAGCCT GCGCACCAAA GATACCATGA CCGCTGTGGT CGCGCCACGT
CTGTTTGCAG CAGCCGACAC GCCGGAGAAG ATGCTGGCGC TTGGCGAAGA CGAGATTGCC
GCACTGATCT ATCCGGTCGG CTTCTACCGC AACAAAGCGC GCACGATCCG CACGATCTGT
CAAATCCTTA TCGATCAGTA TGGCGGCGAG GTTCCTGCCG ATCTCGATGC GTTACTGGCA
CTGCCCGGCG TCGGGAGGAA AACCGCCAAC CTGGTGCTTA CCGCCGGTTT CGATCTGCCG
GGGATCTGTG TTGACACCCA CGTTCACCGC ATCTGTAATC GTTGGGGCTA TGTGCAAACC
AGAACGCCTG AAGAGACGGA AATGAGACTG CGTGAGATTC TGCCGCCGGA ATACTGGAAG
GAGATTAACG GGTTGCTGGT GACCCTTGGG CAGAATATCT GCCACCCGAC CTCGCCGCGC
TGTAGTGTTT GTCCGCTGGC GCATCTCTGC GCGCGGATCG GTGTGGAGCG CCGTCGTTAG
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| Protein sequence | MTGFDIHAAM AILRAEMPRF PKPLIDGMGE EEARNPFRIL IATILSLRTK DTMTAVVAPR
LFAAADTPEK MLALGEDEIA ALIYPVGFYR NKARTIRTIC QILIDQYGGE VPADLDALLA
LPGVGRKTAN LVLTAGFDLP GICVDTHVHR ICNRWGYVQT RTPEETEMRL REILPPEYWK
EINGLLVTLG QNICHPTSPR CSVCPLAHLC ARIGVERRR
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