Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2480 |
Symbol | |
ID | 5209449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3067323 |
End bp | 3068558 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640596085 |
Product | beta-lactamase |
Protein accession | YP_001276807 |
Protein GI | 148656602 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.26212 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA CAGCCGCATC TCCCGAAAGC GTCGGCATCA GTTCTGACCG TCTGGCGCGC ATTCGTCCGG CGATGCAACG CTGGATCGAC CGGGGAACTA TTGCTGGCGC AAGTATGATG ATCGCACGGC GTGGCACGAT CGTCTACGCC GAGCAGGTTG GGCGGATGAG CAAGGAAACC GACGAGGCGT TGCGGAGTGA TGCCATTTTT CGCATCTACT CGATGACCAA GCCGATCGTC TGCACCGCCC TGATGACGCT CTACGAGGAA GGGCGTTTCC AGTTGATCAC ACCGCTGGCG ACGTTCATCC CGGCGTTCGC AAACGTCAAA GTATTGCAAC AGGATAAAGA AGTCGCGCCG CAACGTCCGA TCACCATTGG CGACCTGATG ACCCACCTGG GCGGGTTCAC CTATGACTTC CTGATCGACT CGCCGGTCGG CGAGTTGTAC CGTCAGCACG AACTGATGCA CAATGCACAG CGCACGCTGC AACAGTTCGT CGACGAGCTC GCCCGACTGC CGCTGGCGTA CCATCCCGGC ACGAAGTGGC ACTACAGCGT CTCGATCGAT GTCGCAGCGC ACGTGATCGA GATCATCGCC GACCAACCCC TGCGTCATTT TCTCCGCGAA CGGATCTTCG ATCCGCTCGG CATGGTCGAT ACCGACTTCT ACGTGCCGCC GGAGAAGCGT CACCGCCTGG CTGCCATGTA CGGCGTCGGC GATCTGGGGG CGCGGGGTAT GACGATCCTG CAGATGTTCT TCAACTGGCA ACAGGGGATC CTGGAGCGGA TCGATCCGCA GGAGAGCTAT CCGGTCGATC AGCCGGAGAC CTTTGCGCGC GGCGGTCATG GACTGTTCTC GACAGTGCAG GACTACATGC GGTTCGCATT GATGCTACTC AACGGCGGAA CGCTCGACGG GACGCGCATC CTGGGACGCA AGACGCTGGA ACTGATGCAC GCCAACCACA TCCCGCCGGC GCTTCTGCCA TGGGATATTG CCGGCATCGC ATACCCCGGC TACGGGTTTG GTCTTGGATC GCGCGTCTTG ATGGACGTCG GGCTGTCGGG CATGCCGGGA ACAGCAGGCG AATTCGGATG GGCTGGCGCT GCCACGACCT ACTACTGGGT CGATCCTGCC GAGTCATTCG CTGGCGTCTT CATGACGCAA TACCAGGGAC TGGATGAACC GCAGCGCGAC TTTCGTGCGC TGGCATACCA GGCAATTGTG GACTAG
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Protein sequence | MSDTAASPES VGISSDRLAR IRPAMQRWID RGTIAGASMM IARRGTIVYA EQVGRMSKET DEALRSDAIF RIYSMTKPIV CTALMTLYEE GRFQLITPLA TFIPAFANVK VLQQDKEVAP QRPITIGDLM THLGGFTYDF LIDSPVGELY RQHELMHNAQ RTLQQFVDEL ARLPLAYHPG TKWHYSVSID VAAHVIEIIA DQPLRHFLRE RIFDPLGMVD TDFYVPPEKR HRLAAMYGVG DLGARGMTIL QMFFNWQQGI LERIDPQESY PVDQPETFAR GGHGLFSTVQ DYMRFALMLL NGGTLDGTRI LGRKTLELMH ANHIPPALLP WDIAGIAYPG YGFGLGSRVL MDVGLSGMPG TAGEFGWAGA ATTYYWVDPA ESFAGVFMTQ YQGLDEPQRD FRALAYQAIV D
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