| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2478 |
|---|
| Symbol | |
|---|
| ID | 5209447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 3064772 |
|---|
| End bp | 3066133 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640596083 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001276805 |
|---|
| Protein GI | 148656600 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.171856 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTCC AGTCAACAAT TGATCGCGGC GATGGCCTGG TCGTACGCTG GTCAACCGCC
GCCGATCAGG AGCGTATCGC CGATCTGTTT TCCCACGTCT TTCGTCGCTC TGCCGATGAT
CCGCCAAATG CGCGTATGAT CGCGTATGTG CAGCATCAGA TGAGTGGGTG CCATCCATTG
ATCGGACCAA ACGACATCGC GCTGGTCGAG GATGCGCAAC GCGGGATCGT GGTTGCGGCA
ACGTCGGTGA TGCGGCAGCG CTGGGAGTAT GCTGGCGTCC CGTTTACGCT CAGCCGCGCC
GAGCCGGTCG CTGCACACGA AGAGTACCGC AACCGCGGTC TGGTGCGCGC CACGTTCGAT
CTGATGCACG CCCGCAGCGC CGAACGCGGC GACCTGGCGC AGTGCATTAC CGGAATCCCT
TATTTCTACC GGCAGTTCGG CTATGAGTAC GCGGTCGATC TAGGCGGCTC ACGCAGTGTG
GCGCTGACCA TGATCCCCGA CGCAAAAGAA GGGCAGCCCG AACCGTTCAC GCTGCGCGAC
GCCACTATCG ATGACCTGCC GCAGATCCGG ATGCTGTACG AACGGGAGCG GTCGCGCAAT
GTCAATGGAT TGCCCATCCT CGTCTCGACC CCGTTCGATC ACGACCACTG GCGCTGGACG
CTGAGCGGGC AAACGGTTGA TGCGGGTGAA GGATGGAATA CCCGGATGAT TGTCCGCCCC
GATGGGCAAC CCGTCGGGTA TGTGCTGACC GGGCGCGTGC GCTGGAGTCC GGATCAGGTG
CGGGTTGTGG GGATGATGGT CGAACCGGGC ATACCACTGA CCGCTGTGAT GCCGCCGGTG
CTGCGTGCGC TGCGTACGAT TGCGCCGACG GTGCCGAATG CTCCGCCGAA GACCGGCGAA
CCGCGCCGAC TGGTCTTCAG CCTGGGCGCA GCGCACCCGG TGTACGAGGC GCTGGGGCGC
GATCTGATCA TGCGGACGGA GCAGCCGTAT GGGTGGTATG TGCGCGTGCC GGATGTGCCG
CTGTTCTTGC GCCACATTCG CGCTGTACTG GAGCGACGTC TGGCGGGATC GTTCCTGGCA
GGATACACCG GTGAACTGAA CATTGATTTC TACAAAAGCG GTCTGCGCCT GGTTTTCGAC
CAGGGTCGGA TAGCCTTCAT CGAGCCGTGG CGACCGCCGG TGTACGGTGA TGAAGCCAGC
GCTGGCTTTC CGCCGCTGGT GTTCTTGCAA CTGATGTTTG GACGGCGCAG TCTGGAGGAG
TTGTGCGCCT GGCATGACGA TGTGTGGGCG GATGACGAAC CGGCGATGGT GTTGAATACC
CTCTTCCCGA AACAGCCATC GTGGGTGCTA CCGTTGGATT GA
|
|---|
| Protein sequence | MPVQSTIDRG DGLVVRWSTA ADQERIADLF SHVFRRSADD PPNARMIAYV QHQMSGCHPL
IGPNDIALVE DAQRGIVVAA TSVMRQRWEY AGVPFTLSRA EPVAAHEEYR NRGLVRATFD
LMHARSAERG DLAQCITGIP YFYRQFGYEY AVDLGGSRSV ALTMIPDAKE GQPEPFTLRD
ATIDDLPQIR MLYERERSRN VNGLPILVST PFDHDHWRWT LSGQTVDAGE GWNTRMIVRP
DGQPVGYVLT GRVRWSPDQV RVVGMMVEPG IPLTAVMPPV LRALRTIAPT VPNAPPKTGE
PRRLVFSLGA AHPVYEALGR DLIMRTEQPY GWYVRVPDVP LFLRHIRAVL ERRLAGSFLA
GYTGELNIDF YKSGLRLVFD QGRIAFIEPW RPPVYGDEAS AGFPPLVFLQ LMFGRRSLEE
LCAWHDDVWA DDEPAMVLNT LFPKQPSWVL PLD
|
|---|
| |