Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2461 |
Symbol | asnB |
ID | 5209430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3047151 |
End bp | 3048647 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640596066 |
Product | asparagine synthetase B |
Protein accession | YP_001276788 |
Protein GI | 148656583 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.153372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGCGGTA TTGCAGGCGC GTATCGAACC ACAGACACTG TGCGCATCGA GCAGATGCTT GACCGGCTAA CCCACCGAGG ACCTGATGGA CAGGGCGTGG TAGCCACCGA TACAGGCGTT CTGGGGCATA CACGCCTGGC AATCATCGAT CTGGAAGGCG GTCGGCAACC GATGGAGCAC GATGGCGCGC TGATCTGTTT CAACGGCGAG ATCTACAACT ACCGCATCTT GCGTGATCGC TATCTCCGTG ATCAGACACT CGAAACCGAT AGCGACACCG AGGTGCTGTT GCGCCTGTAC CGCACACTCG GTCCCGGCTT TGTCAACCTG CTCGAAGGGA TGTTTGCGTT TGCCATTCTC GATGGCGACG ATCTCTTTCT CGCGCGCGAC CCGATCGGCA TCAAGCCGCT TTATCTGGCA CAGCGCGACC ACACGTTGCT GTTTGCTTCG GAAATCAAAG CGCTCGCGCT GCAAGCCGAT CAGGTGACGA CGTTTCCGCC AGGGACATGG TATCACTCGC GCTTCGGCAG CCATGCCTAT TACGAGTTTG CTCAGGGTTG GCCCCGAAAC GGCGTCTTCG AGACTGTCGA ACAGGCGAAG AACGCTATTC GCGCGGTACT GCGCTCAGCC GTTCATAAGC GTTTGCTGGC GGATGTTCCG GTGGGGGTCA GTCTCAGCGG CGGACTCGAT AGCAGCATTA TCGCGCTCCT GGCATGCGCA GAACTCGATC ATATCGAAAC GTTCGCCGTT GGGATGGAGG GCAGCGAGGA TCTGGAAGCG GCGCGTCGGA TGGCGCAGTA TCTGGGAACA CGTCATTACG AGTATGTGTA TACACGCGCC GAAATGGAAG CTGTGCTGCC CGACGTGATC TACTATCTCG AATCGGCCGA TCCGGCGCTG GTGCGTAGCG CTGTACCGAA CTACTTCCTG GCGCGACTGG CTTCCGAGCG GGTGAAAGTG ATTCTCACCG GCGAGGGCGC CGATGAACTG TACGCCGGGT ACGACTACAT GCGTGCGCTG ACAACGCCGG AAGATCTTCA TCGTGAGCTT GAAATAGCGA TCCGCGAACT GCATCGCACC AATCTTCAAC GCGCTGATCG CATGTTCATG GCGTTCGGCG TCGAAGGGCG CGTGCCGTTC CTGGACGTGG AGTCGATTGC GCTGGCGCTC AGTCTGCCGC CGGAATGGAA ACTGGCAGCG CCCGGCGAAC CGACGAAAAT GCTGCTCCGC GAGGCGTTCG CCAGCGATCT GCCCGAGTCG ATTGTGCAGC GCCCCAAGCA GAAGTTCTCT GCCGGCGCCG GCTCAATGTA CGAACTTGCC AGAGTTGCTG AAGAACGGTT TGATGACCAG ACGTTTGCGC GGGAGCGCCA GCGCCTGATG CAGCGCTGGA ACTATCGCCT TCCAAACAAA GAAGCGCTCT ACTATCTCGA TACCCTGCGC GCCGTGCTTC CAGAGCGCCT GATCATGCCG GAGATGGGGA TGAGTCGGAG CCTCTGA
|
Protein sequence | MCGIAGAYRT TDTVRIEQML DRLTHRGPDG QGVVATDTGV LGHTRLAIID LEGGRQPMEH DGALICFNGE IYNYRILRDR YLRDQTLETD SDTEVLLRLY RTLGPGFVNL LEGMFAFAIL DGDDLFLARD PIGIKPLYLA QRDHTLLFAS EIKALALQAD QVTTFPPGTW YHSRFGSHAY YEFAQGWPRN GVFETVEQAK NAIRAVLRSA VHKRLLADVP VGVSLSGGLD SSIIALLACA ELDHIETFAV GMEGSEDLEA ARRMAQYLGT RHYEYVYTRA EMEAVLPDVI YYLESADPAL VRSAVPNYFL ARLASERVKV ILTGEGADEL YAGYDYMRAL TTPEDLHREL EIAIRELHRT NLQRADRMFM AFGVEGRVPF LDVESIALAL SLPPEWKLAA PGEPTKMLLR EAFASDLPES IVQRPKQKFS AGAGSMYELA RVAEERFDDQ TFARERQRLM QRWNYRLPNK EALYYLDTLR AVLPERLIMP EMGMSRSL
|
| |