Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2456 |
Symbol | |
ID | 5209425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3040297 |
End bp | 3041712 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640596061 |
Product | hypothetical protein |
Protein accession | YP_001276783 |
Protein GI | 148656578 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02946] acyltransferase, WS/DGAT/MGAT |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.201972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAGG CTTCCCATCC TCTCAGCGCC GTCGACAGCG CCTGGTTGCA TATGGACGAT CCGACCAATC TGATGATGGT TACCGGAGTT GCGCTGCTCG ATGGACCGAT TGATGTCGAA CGCTGCTACA AGACGTTTGA GTCGCGTTTG TTGTCTTTTG ATCGCTTTCG CATGCGGGTG ACGGATCACC GTGATGCGTT GAACGCTCCC CGGTGGGAAC CTGATCCTTA TTTCTCGCTC CGCTCCCATA TTCACCGGGT GGCGCTGCCA TCGCCCGGTG ATATGACCAC TCTTCAGGAA TTCCTCGGTG ATCTGGCAAG TACGCCGCTC GACCGCACCA AACCACTCTG GCAGGTGCAT CTGGTCGAGA ATGTCCTCGG TGGCTCAGCG ATTGTGATGC GCTTCCATCA TTGCATCGGC GACGGCACTG CCATGAACAC GGTGATGCAC CGGTTGATGG ATACCACGCC TGATGCGCCG ATCGAGCGCC CGACGCCGCA CTCCAATCAT GACCACACAC TCGGTCCGTT GCTGGAGCCG CTTGTCTCGA CGATTGAAGG AACGATCAAA CTGGCGGACG ATCTGGTTCA CGAAGGGATG GAGTTCCTCC GTCATCCCGA ACATCTGCTC GATCTACCGG CTCAGGCAGC CAGCGGGGCG CTGGCGCTGA GTCGGGTGTT GCTGCTGTCG CCCGAAACAA AGACGCCGTT CAAGGGACCG CTCGGCGTGC AAAAGCGCGT CGCCTGGTCG GCGCCTGTAC CCCTGGATCA GGTGAAGCAG ATCGGGAAGG TTGCTGGCGC AAAAGTGAAT GACGTGCTGC TGGCAGCCGT AGCAGGGGCG CTGCGCGCCT ATCTGATCGG GCGCAATTTC AAGGTGGACG GACTGGAGAT CCGCGCGGTG ATTCCGGTCG ATCTACGACC GCCGTCGCGC GCTCACGATC TGGGGAATGA GTTCGGACTG GTCTTCCTGT CACTGCCGCT GGGAACGCCC GGTCCGGTCA TGCGGCTCGC CGAGGTCAAG CAGCGGATGG AGGCGCTCAA ACGCTCACCC GAAGCGTATG TCTTCTACGG TCTGCTCAAT TTCTTCGGGC GCACGCCAGC GCAGGTGGAG GAGCAGGCGG TCAATCTCTT CGGCAGCAAG GCGACTGCCG TAATGACCAA TGTGCGCGGT CCGACGGAGC AACTGTATCT GGCCGGCAAT CGGATCAAGA ACATCATGTT CTGGGTGCCG CAATCCGGGC GACTCGGCAT GGGGATCAGC ATTATGAGTT ACTGCGGACA GGTGACGCTT GGGGTGATCA CCGACACAGG GCTGGTTCCC GACCCGCAGA CCATAACTGA GGCGTTCGAG CGAGAGTTCC ACGTGCTCTA TGATGCTATC GTGGCGAAAG AGCACGGCAT CGAATCGGCT TCGTGA
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Protein sequence | MAQASHPLSA VDSAWLHMDD PTNLMMVTGV ALLDGPIDVE RCYKTFESRL LSFDRFRMRV TDHRDALNAP RWEPDPYFSL RSHIHRVALP SPGDMTTLQE FLGDLASTPL DRTKPLWQVH LVENVLGGSA IVMRFHHCIG DGTAMNTVMH RLMDTTPDAP IERPTPHSNH DHTLGPLLEP LVSTIEGTIK LADDLVHEGM EFLRHPEHLL DLPAQAASGA LALSRVLLLS PETKTPFKGP LGVQKRVAWS APVPLDQVKQ IGKVAGAKVN DVLLAAVAGA LRAYLIGRNF KVDGLEIRAV IPVDLRPPSR AHDLGNEFGL VFLSLPLGTP GPVMRLAEVK QRMEALKRSP EAYVFYGLLN FFGRTPAQVE EQAVNLFGSK ATAVMTNVRG PTEQLYLAGN RIKNIMFWVP QSGRLGMGIS IMSYCGQVTL GVITDTGLVP DPQTITEAFE REFHVLYDAI VAKEHGIESA S
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