Gene RoseRS_2447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2447 
Symbol 
ID5209416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3022128 
End bp3024452 
Gene Length2325 bp 
Protein Length774 aa 
Translation table11 
GC content62% 
IMG OID640596052 
Productaldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 
Protein accessionYP_001276774 
Protein GI148656569 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID[TIGR02416] carbon-monoxide dehydrogenase, large subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.916043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.677421 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTATG CATCGTTGAT TGGCGCAGAG GTGCGCCGCA AGGAGGATCC GCGTCTGATT 
TCCGGCGCAG GGCGTTATGT CGGCGACATA ACATTGCCCG GCATGCAGTA CGTCGCTTTC
GTCCGCAGTC CCTACCCGCA TGCCCGTATC GGCGCCATTG ACTCTTCGCA GGCGCTCCGC
GTTTCCGGGG TGACGGCGGT TGTGACCGGT GAAGATCTGC GCGACGTATA CACCGAGATG
TTGTTCGAAG GCAGCGAAGG ATCGGACGTA TCCGGCGAAG CGCCGCCGCG CCACTCACAC
TATCCTGTCT CAATCGAGAA GGTGCGTCAC GTGGGGGAAA TCGTTGCAGC AGTCATTGCG
ACCACTCCTG CCGCCGCCGC CGATGGCGTT GCCGCAGTTA TAGTGGACTG GCAGCCACTG
CCGGCAGTCG CCGATATGGA ACAGGCGCTC CGTCCTGATG CTCCGCTTTT GTTCGAGGGG
ACGCAGAACA ATATCGACCA TGTGTGGCAG CGCAAGCGTG GTGATGTCGA AGCGGCTTTC
GCCGGCGCCC ATCGGGTTGT GAAACTCCGC ATGGTCAGTC AGCGTCTGTC GGGTGTGCCG
ATGGAGGGGC GCGCCGTGCT CACCGCACCC GATCCGACAA CCGGTGGATT GACGGTCTGG
ACCAGCACCC AGGCGGCGCA CTGGATCCGA CGCGATCTGG CGAAGATGCT GGGGATGCCC
GAAAATCAGA TCCGCGTGAT CGCCCCCGAT GTCGGCGGCG GGTTCGGCGT CAAGATCGGC
GTCTATCCCG AAGAAGCGGC GCTGGCGGCG CTGACGCGAC GCCTTGGCAT TCCGCTGCGC
TGGGTCGAGA CGCGCCTGGA ACACATGCAG GCGACCACGC ACGGGCGCGC GCAAATTGCT
GATTACGAGG CGGCAGTGAC CGCCGACGGC ATCGTAACGG CGTTGCGCGC CCGTGTGATC
GCCGATCTCG GCGCGTATCC GGTATCGGCG GCTATTCCCG ACCTGACCGG GATGATGGCC
GTGGGGGTGT ATCAGATTCC GGCTGTTGAT TACGAGATCA CGTGCGTCTA CACCAACACC
ACGCCGGTTG CCGCCTACCG CGGCGCGGGT CGCCCGGAAG CCGCCTATTA TATCGAGCGT
CTGATGGACA CAATTGCGCT TGAACTGAAC CTTGATCCGG TTGATGTGCG CCGGCGCAAT
TTCATTCCAC CCGATGCCTT CCCCTACAAA ACGCCGACCG GTCCGCTGTA CGATAGCGGC
GACTACGACA AGCCGTTGAG GAAAGCGCTC GAAGTCGGAC GCTATACCGA TCTGCGCGCT
GAGCAGCAGC AACGCCTTGC AGCGCGCGCT GCGGGCGAGC GTGTGCCGTT GTTGGGCATC
GGCATTGCCT GCTATGTCGA AATGTGCGGC TTTGGTCCCT TTGAAAGCGC GCACGTGCGT
GTCGAACCGT CTGGAACAGT CACCGTTATG ACCGGTATCT CGCCGCACGG TCAGGGGAAT
GCCACGACAT TCGCCCAGAT CGTCGCCGAT CAACTGGGCG CCGATTTTGA CAGCGTGGTG
GTGATCAGCG GCGATACGGC GATGACCCCG ATGGGCAATG GCACGATGGG CAGCCGTAGC
CTGGCGGTCG GCGGCGGTGC GCTGGTGCGC GCGCTTGCGC AGGTGCGCGA GAAAGCGCGC
CGGATTGCCG CTCATATGCT CGAAGCCGCG ATCGACGATG TCGTCTTTGA AGAGGGACGG
TATCACGTCA AAGGTTCGCC CGACAGCGGT CTCACCCTGG CGCAGATCGC CGAACGCGCC
TACTCCGACG ACCTGCCCGA TGATGTCGAT CCCGGACTGG AGGCGACCGA TTTCTTCAAG
CCGCCAGCAT TGATCTACCC CTTCGGCGCG CATCTGGCAG TCGTGGAGGT CGATCCCGAC
ACCGGTATCG TCACCGTGCG CGACTATGTC AGCGTCGATG ATTGCGGTCC ACGCATCAGC
CCGATCATTG TCGCCGGTCA GGTGCATGGC GGGCTGGCGC AGGGTATCGC GCAGGCGCTG
TTCGAGGAAG TTGTGTACGA CGAAAACGGA CAGTTGCTCA GTGGGTCGCT TATGGATTAT
ACTCTTCCTC GCGCCGATGA TCTGCCCTCG TTCGTGGTTG AACAAACGAT TACGCCGACG
CCGCACAATC CGCTGGGCGC CAAAGGAATT GGTGAAGCAG CGACAATTGG CTCGACACCG
GCGATCGTCA ATGCAGTGGT GGATGCACTG AAGCATCTGG GCGTACGGCA TATCGATATG
CCGCTGCGAC CCGAGAAGGT CTGGCGCGCC TGCAATCAGG CGTAA
 
Protein sequence
MAYASLIGAE VRRKEDPRLI SGAGRYVGDI TLPGMQYVAF VRSPYPHARI GAIDSSQALR 
VSGVTAVVTG EDLRDVYTEM LFEGSEGSDV SGEAPPRHSH YPVSIEKVRH VGEIVAAVIA
TTPAAAADGV AAVIVDWQPL PAVADMEQAL RPDAPLLFEG TQNNIDHVWQ RKRGDVEAAF
AGAHRVVKLR MVSQRLSGVP MEGRAVLTAP DPTTGGLTVW TSTQAAHWIR RDLAKMLGMP
ENQIRVIAPD VGGGFGVKIG VYPEEAALAA LTRRLGIPLR WVETRLEHMQ ATTHGRAQIA
DYEAAVTADG IVTALRARVI ADLGAYPVSA AIPDLTGMMA VGVYQIPAVD YEITCVYTNT
TPVAAYRGAG RPEAAYYIER LMDTIALELN LDPVDVRRRN FIPPDAFPYK TPTGPLYDSG
DYDKPLRKAL EVGRYTDLRA EQQQRLAARA AGERVPLLGI GIACYVEMCG FGPFESAHVR
VEPSGTVTVM TGISPHGQGN ATTFAQIVAD QLGADFDSVV VISGDTAMTP MGNGTMGSRS
LAVGGGALVR ALAQVREKAR RIAAHMLEAA IDDVVFEEGR YHVKGSPDSG LTLAQIAERA
YSDDLPDDVD PGLEATDFFK PPALIYPFGA HLAVVEVDPD TGIVTVRDYV SVDDCGPRIS
PIIVAGQVHG GLAQGIAQAL FEEVVYDENG QLLSGSLMDY TLPRADDLPS FVVEQTITPT
PHNPLGAKGI GEAATIGSTP AIVNAVVDAL KHLGVRHIDM PLRPEKVWRA CNQA