Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2421 |
Symbol | |
ID | 5209390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2993059 |
End bp | 2993736 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640596026 |
Product | hypothetical protein |
Protein accession | YP_001276748 |
Protein GI | 148656543 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.275443 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAACGTT TTCCTGCTCA TCTGCTGCCT CGCTTGAGTG CGCGCCGTCT GATCTCCGTC GCGCTGGCGA TCCTGCTGGT CGGCGCCGTT TTCTGGCTGT TCCGCACCTC TGGCGAGTTG CTCAATCCTT CCGTCATCCG CACCACCATC ATCGCACTTG GTCCACTTGG TCCGCTGGCG CTGATCGGCG CACTGGCACT GTTGCTGGTC GCCCCGATCG CGCCTGCGGC AGTGTTGCAG ATCGGCGCAG GACTGGCATT CGGACCGCTG ATCGGGTTTC TGTACACGTT GATCGCTGAT GCAATTGGGG CGAGTATCGG ATTCTGGCTT GCCAGGCGGT GGGGGCGTGC GCTGCTTGAT CCGCGATTGT CGCCGGAGAT GCGCGCACAG GTTGAACGTC TGGCGCAGCG CGTGACCTGG CGCAGTGTTA TGATCCTGCG CCTGCTGCCG GGTCCGGCGT ATCCGCTGGT GTCGTTCGCT GCCGGCTATT CGCGGCTGGG GTTTGGTGCA TATACGCTGG CGTCGCTCGC CGGGGTAGCG CCAGCGCTTG CGCTGCTGGC ATTTGCCGGC GACCTGGTGA CGCGCTCACC TCTTCTGGCG TTTGGGCTGG TTGCGCTGCT GGTCGGTTCG CTGGCGATTG TCGGGCGCTG GGTGAGCCGG CGTTCGCCTC CCGCGTAA
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Protein sequence | MERFPAHLLP RLSARRLISV ALAILLVGAV FWLFRTSGEL LNPSVIRTTI IALGPLGPLA LIGALALLLV APIAPAAVLQ IGAGLAFGPL IGFLYTLIAD AIGASIGFWL ARRWGRALLD PRLSPEMRAQ VERLAQRVTW RSVMILRLLP GPAYPLVSFA AGYSRLGFGA YTLASLAGVA PALALLAFAG DLVTRSPLLA FGLVALLVGS LAIVGRWVSR RSPPA
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