Gene RoseRS_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2421 
Symbol 
ID5209390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2993059 
End bp2993736 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content65% 
IMG OID640596026 
Producthypothetical protein 
Protein accessionYP_001276748 
Protein GI148656543 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.275443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACGTT TTCCTGCTCA TCTGCTGCCT CGCTTGAGTG CGCGCCGTCT GATCTCCGTC 
GCGCTGGCGA TCCTGCTGGT CGGCGCCGTT TTCTGGCTGT TCCGCACCTC TGGCGAGTTG
CTCAATCCTT CCGTCATCCG CACCACCATC ATCGCACTTG GTCCACTTGG TCCGCTGGCG
CTGATCGGCG CACTGGCACT GTTGCTGGTC GCCCCGATCG CGCCTGCGGC AGTGTTGCAG
ATCGGCGCAG GACTGGCATT CGGACCGCTG ATCGGGTTTC TGTACACGTT GATCGCTGAT
GCAATTGGGG CGAGTATCGG ATTCTGGCTT GCCAGGCGGT GGGGGCGTGC GCTGCTTGAT
CCGCGATTGT CGCCGGAGAT GCGCGCACAG GTTGAACGTC TGGCGCAGCG CGTGACCTGG
CGCAGTGTTA TGATCCTGCG CCTGCTGCCG GGTCCGGCGT ATCCGCTGGT GTCGTTCGCT
GCCGGCTATT CGCGGCTGGG GTTTGGTGCA TATACGCTGG CGTCGCTCGC CGGGGTAGCG
CCAGCGCTTG CGCTGCTGGC ATTTGCCGGC GACCTGGTGA CGCGCTCACC TCTTCTGGCG
TTTGGGCTGG TTGCGCTGCT GGTCGGTTCG CTGGCGATTG TCGGGCGCTG GGTGAGCCGG
CGTTCGCCTC CCGCGTAA
 
Protein sequence
MERFPAHLLP RLSARRLISV ALAILLVGAV FWLFRTSGEL LNPSVIRTTI IALGPLGPLA 
LIGALALLLV APIAPAAVLQ IGAGLAFGPL IGFLYTLIAD AIGASIGFWL ARRWGRALLD
PRLSPEMRAQ VERLAQRVTW RSVMILRLLP GPAYPLVSFA AGYSRLGFGA YTLASLAGVA
PALALLAFAG DLVTRSPLLA FGLVALLVGS LAIVGRWVSR RSPPA