Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2417 |
Symbol | |
ID | 5209386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2989053 |
End bp | 2990090 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640596022 |
Product | hypothetical protein |
Protein accession | YP_001276744 |
Protein GI | 148656539 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein |
TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.486324 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGGAGGT GTCTTATCAG TACGAAAACA GCGCAGCTTC GACGTACTCC CTGGGGCGCC ATTATTGGGC TGCTCTTGCT GGCAGCCATC GTGGCAGTGG CGTACCTCAA CCGCGAAGAG GTGATCAAAG CTTTTGTGCT CCTGCGCAAC GTGCGCCCGC ACTACCTCCT GCTGGCGTTT GGCGCAGTGT TGACAGGCTT TGTGTGTGCG GGACAGATCT ACGGGCGCGT GCTGGCGATG CTCGGTCATC GCGCCAGGTT CTGGTGGTTG ACCGCTGCTG CAATGGTGAC CATCCTGATC AACCAGGCGA TCCCTGCCGG GAGTGTGGGT GCATACGCAT TTCTGGTCGC CAGTCTCCGT CGGCGCGGGT TTCCGGTCGG CAGCGTGGCT ATGGTTGCGG GGATGGAGTT GTTGAGCTGG AACGGCGCCG TGCTGGTGGC GTTCAGTTAT GGGCTGCTCT ATCTGCTGAT TACGTCTGGG CTGAGCGGCG CATCGGTGAG TTATGGCGCG CTGGCAGTAG CGCTGGGAGT GATGAGTGGC GCCATCTACG TGGCGTCACG CCCCGATGTG ACACTTCAGC AGTGGGCGTT GCGTCTGAAA CGCATCGTCA ATCGCCTGTT CGGTCCGGTG CTGACCGCTG CCCAGGTGAC CCAGGCGGTC GATGAGATTC TTGCCAGCCG ACGCCTTATT CTGGAGCAGC CTCGCCGCAT TGTTGTGCTG GTCGGGTTGC AGTTGCTCAT CTTTTGCTGC CACAGTCTGG CGTTGCTGGC GATTCTCCAC AGCCTCGGCG CCGATCCGCC GGTTGCAGCG ATGTTTGCAG CCTATGGTCT GACGCTGATC GTCAGCGTCT TCACCCTGTT GCCCGGCGGC GGCGGAACGG TTGAAGCTGC ACTGACCGTC GCGCTCCATG CTCAGGGGGT GCCCCTCGAA GCCGCGCTGG GCGCTGCTAT TCTGTTCCGC CTGATCAGTT TCTGGATGAT GCTCCCCGTC GGGATGATCT GTTACCGTTT GCTGACCCGT TCCTCCGGCG CTTCCTGA
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Protein sequence | MRRCLISTKT AQLRRTPWGA IIGLLLLAAI VAVAYLNREE VIKAFVLLRN VRPHYLLLAF GAVLTGFVCA GQIYGRVLAM LGHRARFWWL TAAAMVTILI NQAIPAGSVG AYAFLVASLR RRGFPVGSVA MVAGMELLSW NGAVLVAFSY GLLYLLITSG LSGASVSYGA LAVALGVMSG AIYVASRPDV TLQQWALRLK RIVNRLFGPV LTAAQVTQAV DEILASRRLI LEQPRRIVVL VGLQLLIFCC HSLALLAILH SLGADPPVAA MFAAYGLTLI VSVFTLLPGG GGTVEAALTV ALHAQGVPLE AALGAAILFR LISFWMMLPV GMICYRLLTR SSGAS
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