Gene RoseRS_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2417 
Symbol 
ID5209386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2989053 
End bp2990090 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content62% 
IMG OID640596022 
Producthypothetical protein 
Protein accessionYP_001276744 
Protein GI148656539 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.486324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGAGGT GTCTTATCAG TACGAAAACA GCGCAGCTTC GACGTACTCC CTGGGGCGCC 
ATTATTGGGC TGCTCTTGCT GGCAGCCATC GTGGCAGTGG CGTACCTCAA CCGCGAAGAG
GTGATCAAAG CTTTTGTGCT CCTGCGCAAC GTGCGCCCGC ACTACCTCCT GCTGGCGTTT
GGCGCAGTGT TGACAGGCTT TGTGTGTGCG GGACAGATCT ACGGGCGCGT GCTGGCGATG
CTCGGTCATC GCGCCAGGTT CTGGTGGTTG ACCGCTGCTG CAATGGTGAC CATCCTGATC
AACCAGGCGA TCCCTGCCGG GAGTGTGGGT GCATACGCAT TTCTGGTCGC CAGTCTCCGT
CGGCGCGGGT TTCCGGTCGG CAGCGTGGCT ATGGTTGCGG GGATGGAGTT GTTGAGCTGG
AACGGCGCCG TGCTGGTGGC GTTCAGTTAT GGGCTGCTCT ATCTGCTGAT TACGTCTGGG
CTGAGCGGCG CATCGGTGAG TTATGGCGCG CTGGCAGTAG CGCTGGGAGT GATGAGTGGC
GCCATCTACG TGGCGTCACG CCCCGATGTG ACACTTCAGC AGTGGGCGTT GCGTCTGAAA
CGCATCGTCA ATCGCCTGTT CGGTCCGGTG CTGACCGCTG CCCAGGTGAC CCAGGCGGTC
GATGAGATTC TTGCCAGCCG ACGCCTTATT CTGGAGCAGC CTCGCCGCAT TGTTGTGCTG
GTCGGGTTGC AGTTGCTCAT CTTTTGCTGC CACAGTCTGG CGTTGCTGGC GATTCTCCAC
AGCCTCGGCG CCGATCCGCC GGTTGCAGCG ATGTTTGCAG CCTATGGTCT GACGCTGATC
GTCAGCGTCT TCACCCTGTT GCCCGGCGGC GGCGGAACGG TTGAAGCTGC ACTGACCGTC
GCGCTCCATG CTCAGGGGGT GCCCCTCGAA GCCGCGCTGG GCGCTGCTAT TCTGTTCCGC
CTGATCAGTT TCTGGATGAT GCTCCCCGTC GGGATGATCT GTTACCGTTT GCTGACCCGT
TCCTCCGGCG CTTCCTGA
 
Protein sequence
MRRCLISTKT AQLRRTPWGA IIGLLLLAAI VAVAYLNREE VIKAFVLLRN VRPHYLLLAF 
GAVLTGFVCA GQIYGRVLAM LGHRARFWWL TAAAMVTILI NQAIPAGSVG AYAFLVASLR
RRGFPVGSVA MVAGMELLSW NGAVLVAFSY GLLYLLITSG LSGASVSYGA LAVALGVMSG
AIYVASRPDV TLQQWALRLK RIVNRLFGPV LTAAQVTQAV DEILASRRLI LEQPRRIVVL
VGLQLLIFCC HSLALLAILH SLGADPPVAA MFAAYGLTLI VSVFTLLPGG GGTVEAALTV
ALHAQGVPLE AALGAAILFR LISFWMMLPV GMICYRLLTR SSGAS