Gene RoseRS_2379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2379 
Symbol 
ID5209348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2943216 
End bp2944361 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content61% 
IMG OID640595985 
Productglycosyl transferase, group 1 
Protein accessionYP_001276707 
Protein GI148656502 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGTC TGCGTATCCT GCATGTTATC GAAACACTCT GGCTGGGTGG AGCGCAACGG 
TTGCTGCCGG GCTTGCTGAA GGGTCTCGAT CCGCACCGGT TCGACAGTCA CCTGGTCGGG
CTGCACGACG GACCGTTACG GCAGGAGTTC GAGTCGGCGC ATATTCCGCT CACGATGCTG
AACGCGCGTC GCTTCTATGA GCCACGGGTG GTTGCGGCGC TGGTGCGCAT CATACGTGAG
GGCAACTTTG ATGTGGTGCA TACCCACCTC ACCGGCGCCG ATGTGGTTGG GCGTGTTGCT
GGCGCGCTGA CCGGCGTTCC GGTCGTATCG ACGATGCACA ATATTCCCCA CGACTATAAT
CAGCAGAAGT TTCACCGCCG CCTGTTGCAA CGCCTGACGG CGCGAACGCT GACAACACGC
CTGGTTATGG TTGCGCCAGG CATCGGCAGC GCATATGAAC GTCAGTGGAA GATTCCCCGG
TCACGGATCG TTGCGATCAA TAATGCTGTG CCGATGGAGC CATATCTGGC GATTGCTGAG
GGAGTCGCAG ACGGTCTTCC ACCAACAGTG ACGACGATCG GGCGGTTAAG TGCACAAAAG
GCGCACCACA TCCTGCTGGA AGCATTTCGC CTGGTTCTTC ACAAGCGCCC GGACGCTCGT
CTCCGCATCG TCGGCGATGG ACGCCTGGAG GCGGCGCTCC GCCAGCAAGC GTTCTTGATC
GATATTGCTC ATGCCGTGGC TTTTGAAGGA CTGCGGCACG ATATTCCGGT CGTTCTGTCG
GAAACGCACG TGTTCACGCT GTCGTCCCTG TGGGAAGGGT TGCCGGTCAC GGCAGTCGAA
GCTATGGCGG CGGCGCGTCC GGTCGTTCTG ACCGATGTCG GCGGGTGCCG CGACCTGGTG
ACTCCCGGCG TGGAAGGGAC GCTCGTGCCG CCGGGAAACG TGTCTGCCCT GGCTGATGCG
CTGATCGAGA TGCTTGGCGA TCCAGATCAG CAGCGCCTGT TTGGTCGGCG TGGTCGGGCA
AAGGTTCGTC AGGAATTCGG TATCGAGCAG TATGTGCGCG GGCACGAGCA GTTGTATCTT
TCGCTCGTCG CGCCTGAACG ACGGGCAGAG ATCGTCGCTG TCGGAGATCA GCGGTCGTCG
GTATGA
 
Protein sequence
MKRLRILHVI ETLWLGGAQR LLPGLLKGLD PHRFDSHLVG LHDGPLRQEF ESAHIPLTML 
NARRFYEPRV VAALVRIIRE GNFDVVHTHL TGADVVGRVA GALTGVPVVS TMHNIPHDYN
QQKFHRRLLQ RLTARTLTTR LVMVAPGIGS AYERQWKIPR SRIVAINNAV PMEPYLAIAE
GVADGLPPTV TTIGRLSAQK AHHILLEAFR LVLHKRPDAR LRIVGDGRLE AALRQQAFLI
DIAHAVAFEG LRHDIPVVLS ETHVFTLSSL WEGLPVTAVE AMAAARPVVL TDVGGCRDLV
TPGVEGTLVP PGNVSALADA LIEMLGDPDQ QRLFGRRGRA KVRQEFGIEQ YVRGHEQLYL
SLVAPERRAE IVAVGDQRSS V