Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2340 |
Symbol | |
ID | 5209307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2894305 |
End bp | 2894985 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640595945 |
Product | hypothetical protein |
Protein accession | YP_001276669 |
Protein GI | 148656464 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.290858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATACTC CGCCTGATCC AATACGCTGG CTATTCCTCC TCGCCGGTGT GCTCGTACTG GCGCTTCTGA TCATCGTGAT CGGACAGAGC GGTGCAGTCC GGCACGTCTT CAGCGCAGCA TCACCGGACG AAGCGGCCGC AATCCTGCGT GAATTCGGGT GGTGGACGCC ACTGGTCAGT GTGCTGCTCA TGGTGCTGCA ATCCGTGCTG GCGCCGCTCC CCGGCTCGCT GATCGCCGCT GCCAATGGCG CGATTTATGG CATCTGGAAG GGAACGCTGC TCTCCTGGAT CGGCGGCATG GCGGGCGGTC TGGCGACGTA TGCCCTGGGA CGCTGGTTGG ACACTGCGAT AGCGCACCGC TGGAAAGCGA CCCGCCTGCA GCAGCGCCTT GTGGAGGTCA GCTCATCCCG TGGGTTCTGG ATCGTCCTGA TCGCCAGAAT GACGCCAATC ATCTCACTCG ATTTCATCGG CTACCTGGCA GGGATCGCGC GGATGCCGCT CCTCTCGTAT ACGCTCGCCA ATGCGATCGG CATGATTCCG GGAATGCTGG CGTACACCGC AATCGGCAGT GAACTGATGC AGGGTCGTCT GCTATCGTGG TATACCGCGC TGGCGCTGCT CGCACTGATC GCGCTCTTTT TCATCGGTCG GCATGCGGTG CGGCGCTTAC TGGAACGTTG A
|
Protein sequence | MNTPPDPIRW LFLLAGVLVL ALLIIVIGQS GAVRHVFSAA SPDEAAAILR EFGWWTPLVS VLLMVLQSVL APLPGSLIAA ANGAIYGIWK GTLLSWIGGM AGGLATYALG RWLDTAIAHR WKATRLQQRL VEVSSSRGFW IVLIARMTPI ISLDFIGYLA GIARMPLLSY TLANAIGMIP GMLAYTAIGS ELMQGRLLSW YTALALLALI ALFFIGRHAV RRLLER
|
| |