Gene RoseRS_2294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2294 
Symbol 
ID5209261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2833134 
End bp2834279 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content58% 
IMG OID640595899 
Productextracellular solute-binding protein 
Protein accessionYP_001276623 
Protein GI148656418 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGTC TACCAGGACC ACTGGTCGCA CGTCTGATGA CGCTGATCAT CAGCGTCACA 
CTGATCGCAG CATGCGGCGG GCAACCTGCC GCGACTCCGC CAACCGCCGC ACCCGCCGAA
CCCACGGCTG CACCAACGAC CGCACCCACC GAACCCACAG CGGCGCCGAC TGCACCAACG
GCTGCACCCA CCGAACCCGC AGCAATGCCA AAGGGTGAGG TGGTCGTCTA TACGACGCGC
GCCGAAGCGT TGTTCAAACC GGTCATCGAA GCGTTCAATG CTGCCTACCC TGATATCAAG
GTCACCGTTC TGAACGGAAG CAATAGCGAA CTGGCTGCGC GTATTCTTGA GGAACGCGCC
AATCCGAAAG CGGATGTGCT GATCAACTCG GATATTCTTA CGATGGAGAA CCTGGCTGCT
GAAGGCGTGT TTGCGCCGAA TAACTCGCCA GCAGTGATGG CTGTTCCGGC TGATTATCGC
GCTGATGATG GCAGCTGGGT CGCGTTGACG CTCCGCGCGC GTGTCATCAT GTACAATACA
GACCTGGTTT CACCCGAAGA ATTGCCGAAA AAGATGGTCG ATCTCGCCGA TCCGAAATGG
AAGGACGTGA TCGGCTCAGC CAACAGCACC AACGGCGCAA TGATGGCGCA ACTGGTCATC
ATGCGCAATC AACTCGGCGA GCCGGCGACC GAAGCCTTCA TTCAGGGGTT GCTTGAGAAC
AACGCGCAGT TCTTCGGCGG GCATACCGAT GTGCGTAAAG CGGTTGGCGC CGGCGAACTG
AAACTCGGGC TGGTCAACCA TTACTACTAC CATCTCTCGA AGGCGGAAGG GGCGCCGGTT
GGCGTCATCT ACCCTGATCA GGAAGATGGC GGATTGGGAT TGATGGTCAA TTCGACTAAT
GCCGGTATCA TCAAGGGCGG ACCAAACCCG GAAATGGCAC GCATCTTCGT CGATTTCATG
CTTTCGCCTG CCGGGCAGAA GATCTATGCT GAGCGGAACT ATGAGTACCC GATTGTGCCA
GGTGTGCCGC TGGCAGAAGG AGTCGCGCCG CTCGATTCGT TCAGGTTGAA CCCTTTCCCG
CTCAAAACAC TGCGGGATGA ACTGGAACCA ACCAGGGCGC TCGTCCAGAA GGTCGGTATG
CCGTAA
 
Protein sequence
MDRLPGPLVA RLMTLIISVT LIAACGGQPA ATPPTAAPAE PTAAPTTAPT EPTAAPTAPT 
AAPTEPAAMP KGEVVVYTTR AEALFKPVIE AFNAAYPDIK VTVLNGSNSE LAARILEERA
NPKADVLINS DILTMENLAA EGVFAPNNSP AVMAVPADYR ADDGSWVALT LRARVIMYNT
DLVSPEELPK KMVDLADPKW KDVIGSANST NGAMMAQLVI MRNQLGEPAT EAFIQGLLEN
NAQFFGGHTD VRKAVGAGEL KLGLVNHYYY HLSKAEGAPV GVIYPDQEDG GLGLMVNSTN
AGIIKGGPNP EMARIFVDFM LSPAGQKIYA ERNYEYPIVP GVPLAEGVAP LDSFRLNPFP
LKTLRDELEP TRALVQKVGM P