Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2262 |
Symbol | hppA |
ID | 5209225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2786740 |
End bp | 2789079 |
Gene Length | 2340 bp |
Protein Length | 779 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640595863 |
Product | membrane-bound proton-translocating pyrophosphatase |
Protein accession | YP_001276591 |
Protein GI | 148656386 |
COG category | [C] Energy production and conversion |
COG ID | [COG3808] Inorganic pyrophosphatase |
TIGRFAM ID | [TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0181184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.903528 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAAC TCAGCAGTTT CGAACAGGCA GCCGTATGGG CAGTGCTTGG CGTTGCGATT TTCGGCATCG CATACGCATT CGTGCTTCGT GCACAGATCC TGGCGCAGGA TAAAGGCACT GCCCGCATGC AAGAGGTGTG GGGATTCATC AAAGACGGCG CCAATGCCTA TCTGAGCCGT CAATTCCGCA CGATTGCCAT CCTGATCGGC GTTCTGACGT TTGTGCTTGC TGCCAGTGTG TTCATCATTC CGCCGACACG CGAAGCCGTC GAGCACTTCG GCAGTGAGGA GACAGCGACG CTATGGGTGG CGATTGGGCG CGCAGTCGCG TTCCTGATGG GGTCGTTGTT CTCGTATGCG GTCGGCTTCG TTGGGATGAA TGTTGCGGTT GAAGGCAATG TTCGTGTTGC CGCTGCATCG CGCAAGGGGT ACAACCCTGC GTTGCAGGTC GCCTACAAGT CCGGGTCGGT GACCGGGATG CTGACGGTGG GGCTTGGGTT GCTAGGCGGT ACGTTGATCT TTATGGTCTA CGGCATCGCT GCGCCGGACG CGCTGCTCGG CTTCGGCTTC GGCGGCTCGC TGATCGCGCT CTTCATGCGC GTCGGCGGCG GCATCTACAC CAAGGCTGCC GATGTCGGCG CCGACCTGGT GGGGAAGGTG GAAGCCGGTA TTCCTGAAGA CGATCCGCGC AATGCAGCAG TGATCGCCGA CCTGGTGGGC GACAATGTTG GTGACTGCGC CGGTATGGCT GCCGACGTGT TTGAGAGTTT CGAGGTGACG CTGGTGTCGG CGTTGATCCT CGGTCTGGTG CTGGGTGATG CAGTGGTCGG CACGCTGGGG GATGGGCAGT ATGATCTGCG ATTCATTGTT TTCCCACTGG TGCTGCGCGC CATTGGCGTG ATCGCGTCGG TTGTCGGCAA CTCGGTGGTC AGCACCGACG AGAAGCGCCG CAATGCGATG GCGGCGATGA ATCGCGGGTT CTACGTCGCC GCTTTTCTCT GCCTTGTCGG GTTTGCAGCG TTTACCGCAG TCTATATGGT CGATCCGACA ACCGGCGCTA TTGACTGGCG TCCGTTCCTG GCGACCATTG CCGGTCTGGC GCTGGCTGTG GCGCTCGATA AACTGACGGA ATACTTCACA TCGACGCACT TCAACCCGGT GAAGGAAACG AGCAAGGCGT CGAAGACGGG CGCAGCCACC AATATTCTTG CCGGTCTGGC GCTCGGCATG GAATCGAGCG TCTGGGCGAT CCTGGTGATC TGTGCGTCGA TCCTGACGTC AATCGCTATC TTCGCCGGGT ACTCGACCGA TCCGGCAGTG ACGCTCACCG CAGTGCTGTA TGGCGTGTCG CTGACCGGTA TCGGTATGCT GACGCTGACC GGGAACACGA TTTCGATGGA CTCGTTCGGT CCGATTTCGG ACAATGCGAA CGGTATCGGC GAGATGGCGG GGTTGGACAA GAATGCGCGC AATGTGATGG ACGACCTGGA CGCGGTCGGC AACACGACCA AGGCGGTCAC CAAAGGCATC GCTATCGGCT CGGCAGTGAT CGCGGCAGTG GCGCTGTACG GTTCGTACCT GGCGGACGTA TCGAAGGTGC AGGAGCAGAT CGGCGTTCCG CTGGCGGAGC AGTTGCGCAC CATCGGCATC AATGTTGCGA TGCCGACGGT TTTCATCGGG TTGCTGATCG GCGGTGCGGT GCCGTTTCTG TTCTCGTCGC TAACGATCCG CGCGGTGCAG CGCGCTGCGT CGCAGATCGT GAACGAGGTG CGTCGTCAGT TCAAGATCCC AGGCATTATG GAGGGCACGG TGACGCCTGA CTATGCGCGG GCGGTGAGTA TCTCCACCGT GGCTGCGCAG AAGGAATTGA TCAGCCTGGG TCTGATCGCG GTGATGGTGC CGATCCTGGT CGGGTTCCTG CTCGGCGTCG AGGCGCTCGG CGGTTTCCTG GCGGGCATCA TTCTCTCCGG TCAGTTGATG GCGGTGTTCC AGGCGAATGC TGGCGGTGCG TGGGATAATG CGAAGAAGTA CATCGAAGAA GGGAACTTCG GCGGGAAGCA CTCGGAGCCG CATAAAGCCG CTGTGGTCGG CGATACGGTC GGCGACCCGC TGAAGGATAC GGCAGGACCC GCGCTGAACC CGATGATCAA GGTGATCAAC CTGGTGGCGC TGATTATTGC GCCGATTGTT GTGACGATCC CCAGCGGCAG TCCGGGAGTC ATTTTTGCGA TGGTGATCTG CGCGGTTGCG CTGGCGTGGG CGATCTGGCA GAGCAAACGC GAAGCGCCGT CGATGACGGC TGAAACGACA GCGCCTGCGA CAACTGCCAG GGGCGTGTAG
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Protein sequence | MQELSSFEQA AVWAVLGVAI FGIAYAFVLR AQILAQDKGT ARMQEVWGFI KDGANAYLSR QFRTIAILIG VLTFVLAASV FIIPPTREAV EHFGSEETAT LWVAIGRAVA FLMGSLFSYA VGFVGMNVAV EGNVRVAAAS RKGYNPALQV AYKSGSVTGM LTVGLGLLGG TLIFMVYGIA APDALLGFGF GGSLIALFMR VGGGIYTKAA DVGADLVGKV EAGIPEDDPR NAAVIADLVG DNVGDCAGMA ADVFESFEVT LVSALILGLV LGDAVVGTLG DGQYDLRFIV FPLVLRAIGV IASVVGNSVV STDEKRRNAM AAMNRGFYVA AFLCLVGFAA FTAVYMVDPT TGAIDWRPFL ATIAGLALAV ALDKLTEYFT STHFNPVKET SKASKTGAAT NILAGLALGM ESSVWAILVI CASILTSIAI FAGYSTDPAV TLTAVLYGVS LTGIGMLTLT GNTISMDSFG PISDNANGIG EMAGLDKNAR NVMDDLDAVG NTTKAVTKGI AIGSAVIAAV ALYGSYLADV SKVQEQIGVP LAEQLRTIGI NVAMPTVFIG LLIGGAVPFL FSSLTIRAVQ RAASQIVNEV RRQFKIPGIM EGTVTPDYAR AVSISTVAAQ KELISLGLIA VMVPILVGFL LGVEALGGFL AGIILSGQLM AVFQANAGGA WDNAKKYIEE GNFGGKHSEP HKAAVVGDTV GDPLKDTAGP ALNPMIKVIN LVALIIAPIV VTIPSGSPGV IFAMVICAVA LAWAIWQSKR EAPSMTAETT APATTARGV
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