Gene RoseRS_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2171 
Symbol 
ID5209133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2672239 
End bp2672901 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content59% 
IMG OID640595772 
Producthypothetical protein 
Protein accessionYP_001276501 
Protein GI148656296 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.26529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATCA AACGCATGGC CAATAGTAGC GAGTCCTGGC TGACCTACTG TCGGAACGCC 
GGGTTGGGTT TTGACCACGA CGAACGGTTG GGTTCGATCC CTCGTCTGCC CAATGTGGAG
GCAGCCCAGC CGCTGATTGA ACAGATTGTC GGGCCGTTTA TGGGATGCAC TATCAAGAAG
GGGCGCACAT TTACCTGGGT TCTGGATCAT CTGCGTGATG GGCGGGGGCA CATCACGCCG
CGCAATCTGG TTAGCCTGTG GGGCTATGCG GCTGCCCAGG AATTGGATGC GGCGCGGGCT
GGCGAGCAGC ACCTGCTACA TCCCACCTCG TTGCGCCACG CGCTGGATCA GGTGTCGGAT
GAGTATGTAC GGTTGCTCAA GAGTCGTGAG ATGCCCTGGT TAGAAGCGCT GACCAGACGA
TTGTTGCAAC GCGAAGTGCC GATGACTCGC CAGGAGTGGG AAGAGATCCT GTCCCAGGAT
TGGTCGGCCT GGCGCAACGA TCCACAGGAA AAGCAGCGCC CGCCGCGCAC AACCCCGGCT
GAATTTCTTG ACTTTTTGCT CGAATTGGGC GTCTGTCGCA CACGCCCGGA CGACCGGATT
GATGTGCCGG ATTTGTTTCT CCACGGGCTG GGCATTAAAC GCCGTGGCGG GGTAAAGCAA
TAG
 
Protein sequence
MLIKRMANSS ESWLTYCRNA GLGFDHDERL GSIPRLPNVE AAQPLIEQIV GPFMGCTIKK 
GRTFTWVLDH LRDGRGHITP RNLVSLWGYA AAQELDAARA GEQHLLHPTS LRHALDQVSD
EYVRLLKSRE MPWLEALTRR LLQREVPMTR QEWEEILSQD WSAWRNDPQE KQRPPRTTPA
EFLDFLLELG VCRTRPDDRI DVPDLFLHGL GIKRRGGVKQ