Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2171 |
Symbol | |
ID | 5209133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2672239 |
End bp | 2672901 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640595772 |
Product | hypothetical protein |
Protein accession | YP_001276501 |
Protein GI | 148656296 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.26529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCATCA AACGCATGGC CAATAGTAGC GAGTCCTGGC TGACCTACTG TCGGAACGCC GGGTTGGGTT TTGACCACGA CGAACGGTTG GGTTCGATCC CTCGTCTGCC CAATGTGGAG GCAGCCCAGC CGCTGATTGA ACAGATTGTC GGGCCGTTTA TGGGATGCAC TATCAAGAAG GGGCGCACAT TTACCTGGGT TCTGGATCAT CTGCGTGATG GGCGGGGGCA CATCACGCCG CGCAATCTGG TTAGCCTGTG GGGCTATGCG GCTGCCCAGG AATTGGATGC GGCGCGGGCT GGCGAGCAGC ACCTGCTACA TCCCACCTCG TTGCGCCACG CGCTGGATCA GGTGTCGGAT GAGTATGTAC GGTTGCTCAA GAGTCGTGAG ATGCCCTGGT TAGAAGCGCT GACCAGACGA TTGTTGCAAC GCGAAGTGCC GATGACTCGC CAGGAGTGGG AAGAGATCCT GTCCCAGGAT TGGTCGGCCT GGCGCAACGA TCCACAGGAA AAGCAGCGCC CGCCGCGCAC AACCCCGGCT GAATTTCTTG ACTTTTTGCT CGAATTGGGC GTCTGTCGCA CACGCCCGGA CGACCGGATT GATGTGCCGG ATTTGTTTCT CCACGGGCTG GGCATTAAAC GCCGTGGCGG GGTAAAGCAA TAG
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Protein sequence | MLIKRMANSS ESWLTYCRNA GLGFDHDERL GSIPRLPNVE AAQPLIEQIV GPFMGCTIKK GRTFTWVLDH LRDGRGHITP RNLVSLWGYA AAQELDAARA GEQHLLHPTS LRHALDQVSD EYVRLLKSRE MPWLEALTRR LLQREVPMTR QEWEEILSQD WSAWRNDPQE KQRPPRTTPA EFLDFLLELG VCRTRPDDRI DVPDLFLHGL GIKRRGGVKQ
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