Gene RoseRS_2070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2070 
Symbol 
ID5209032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2563212 
End bp2563703 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content59% 
IMG OID640595674 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_001276403 
Protein GI148656198 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0237486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.038928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTGTC TCGAACGCCT GAGCGCGTAT CTGCGCGAGA ACTGCGTTTC GTACACGATC 
CGCCATCATC CTGCCGCGTA TACCGCTTTC GCCATCGCAG CCAGCGAACA CATTCCGCCG
CATACCTTCG CCAAGGTCGT CATGGTCTTC ATTGACGGAC GGATGGCGAT GCTTGTCGTG
CCTGCCGATA CTCGCGCCGA TCTGGCGCGT CTTGCCGGTG TGATCGGCGC GCATGAGATC
TGTCTGGCGG ATGAACGCGA ATTTGCGCCG CTCTTTCCCG ATTGCGAACC CGGCGCAATG
CCGCCGTTCG GCAACCTGTA CGGTCTGCCG GTGTATCTTG ATCGCGATCT TGCTGAATGC
GAAACGATCA TGTTCCAGGC TGGCACACAC CAGGATGCAA TCAGTATGCG GAGTGAGGAC
TTCATCCGGC TCGCGCGTCC GTTTATCGCA TCGTTTGAGC GCGATACACG TATGCTGGCG
GGTCATTTCT GA
 
Protein sequence
MTCLERLSAY LRENCVSYTI RHHPAAYTAF AIAASEHIPP HTFAKVVMVF IDGRMAMLVV 
PADTRADLAR LAGVIGAHEI CLADEREFAP LFPDCEPGAM PPFGNLYGLP VYLDRDLAEC
ETIMFQAGTH QDAISMRSED FIRLARPFIA SFERDTRMLA GHF