| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1949 |
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| Symbol | |
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| ID | 5208911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2414746 |
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| End bp | 2416947 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640595558 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001276287 |
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| Protein GI | 148656082 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAT CTGAACACCT TCAATCTGAG AACGACGCAC TACGAACACG TATTCGGGAA
CTCGAGCGGC AACTTCACCA TGCCCGATCT TTCGCTTCTT TTCCACCTTA CGTTTCTCCA
GCTGTCTCCG ATTATTTTAC CGCGTTCCAC GAAACGACGC TGGCGATCAT GAATCGTCTG
GAACTCAACG ATGTGCTGGA GGCGATCGTT GAGCATGCCG CGCGTCTGGC GGGAACGGAG
CACGGCTATA TCCATCTTCG CCTGGCGGAT GCCGAACTGA TGGAGATGAA AGTCGGCATT
GGCCGGTTTG CGTTGAATCG CGGCAGTGTG ATTGCTCCGG GCGAGGGGGT TTCCGGGCGC
GTCTGGCAAT CAGGCGAGCC GATGATGGTG GAGGATTACC GGTCGTGGGA AGGGCGCATC
GAGCGGTTGG AGATGATTGA TTTTGGGGCA GTGATTGCAG CGCCGCTGAA GTCGCGCGGG
GACGTGATCG GGGTGCTGGG AGTGGCGTAT GATGCAGCGA ACCCCTTCGA TTTTCATACC
ATCGCGGCAC TCCTCGCCCG CTTCGCCGAT CTCGCGGCGA TTGCGATTGA TAATGCGCAA
TTGTACACCG CAGCGCAGCG AGAAATTGCT GAGCGACAGC GCATCGAGGC GGAACTGCGC
GCGAGCGCGC AGCATCTGCA CGATCTGTAC ACGGTCACGA AGCGGCAGGC GCAGGAGTTG
CGACTGCTCG GACAGGTGCG TTCGGTGCTG GCGCGGGCGA TCGATCTGTC GGTCATCTTT
TATTCGGTGG TCGAGGCAAT CGCCAGAACC TTCGGCTACA CGCAGGTCTG CATTTATCTG
CGTGAACACG ATGAACTGGT ACTGCAACAT CAGGTCGGGT ATTCGCACAT TCCAGAGCGC
ATTCCGTTCG GAAAAGGGAT TATCAGCCGC ACCATCCTGA GCGAACGACC GGCGCTGATT
GCCGATGTGA GCGCCGACAG CGATTTTCTT GGCGCAATTG AAGGGGTGGT GTCCGAAATT
TGCGTGCCGC TCTGGGAAGA TGACAGGGTT ATCGGAGCGC TCAACGTTGA AAGCATTAAC
GGCGTTGTGC TCACCGAAGA TGACCTGCGT TTGATGACGG AACTGGCGGA ACATATCCAT
GTCGCCATTG AGCGCGCGCG GCTGTATGAG CGGTTGTGGC AGCGCGTGCA GCAACTCGAT
GCGCTGTACA GCATCATGGG CGATATTACC GGCAATCTGA ATCTCGATGA TGTGTTACGG
GCGATCGTAA CGCGGATGCT GACTCTGATA CGCGCCGCGC ACGGTGCGCT GGCGTTGTAC
GACGCGCAGC AGAATCATCT CATTGTCCAT GTGAGCGTTA ACATGGACTA CGACTATGCC
GGTGTGCGCC TGGCGTTGGG GGAGGGGGCG ATGGGCAAGG CGGCGCTTAC GCGCCAGCCG
GTCGTTGTGT GCGACTATCG CGCGTGGAGT GAGCGTTCGC TCCAGTGCGA GGCGGAGTCA
ACGGCGAATG TCCTGGCGGT TCCGCTGCTG GCGGGCGATG AACTGATCGG CGCGATGAGC
GCGGGAGACG GCGATCTCAA GCGAATCTTC ACCGCAGATG ATATCCGGTT GCTCAGCATG
TTCGCGCAAC AGGCGACGGT TGCGATCAAA AATGCCCGTC TGTTTGAAGA AGTGCAGTAT
CTGGCGATCA CCGATCCGCT TACGGGGCTG TACAACCGGC GATATTTTCT GAGTGCGGCG
CGGCGCGAAC TCGAACGCGC GCACCGTCAC CACTCGCCGC TGGTGGTGAT CATTGCCGAT
CTTGACGATT TCAAACGGAT CAACGATGAC TTCGGTCATC CGGTTGGTGA TCGGGCGCTG
CGGGCGTTCA GCGATCTGTT ACGCCGCGAA TTGCGCTCTA TCGATCTGGT GGCGCGCTAT
GGCGGTGAGG AATTCATTCT GCTGTTGCCG GAGACGGACG AAAACGGCGG CGTGCAGGTT
GTCGAGCGTG TGCGCCTGCT GTGGAGCCAG ACAACGATTG CAACCGGTCA GGGGGTGGCG
AGGATGACGT CCAGTTTTGG CATGGCAGTG TATGCTGAGC CGTTTGATGG GATGAGCATC
GATACACTGG TCGCACGGGC GGATGAGGCG CTGCTCTGTG CGAAGCAGGC GGGTAAGAAT
CGGCTGGAAA TCTGGCAGTT GCAGGTGGAA GGCGGAAGGT GA
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| Protein sequence | MNESEHLQSE NDALRTRIRE LERQLHHARS FASFPPYVSP AVSDYFTAFH ETTLAIMNRL
ELNDVLEAIV EHAARLAGTE HGYIHLRLAD AELMEMKVGI GRFALNRGSV IAPGEGVSGR
VWQSGEPMMV EDYRSWEGRI ERLEMIDFGA VIAAPLKSRG DVIGVLGVAY DAANPFDFHT
IAALLARFAD LAAIAIDNAQ LYTAAQREIA ERQRIEAELR ASAQHLHDLY TVTKRQAQEL
RLLGQVRSVL ARAIDLSVIF YSVVEAIART FGYTQVCIYL REHDELVLQH QVGYSHIPER
IPFGKGIISR TILSERPALI ADVSADSDFL GAIEGVVSEI CVPLWEDDRV IGALNVESIN
GVVLTEDDLR LMTELAEHIH VAIERARLYE RLWQRVQQLD ALYSIMGDIT GNLNLDDVLR
AIVTRMLTLI RAAHGALALY DAQQNHLIVH VSVNMDYDYA GVRLALGEGA MGKAALTRQP
VVVCDYRAWS ERSLQCEAES TANVLAVPLL AGDELIGAMS AGDGDLKRIF TADDIRLLSM
FAQQATVAIK NARLFEEVQY LAITDPLTGL YNRRYFLSAA RRELERAHRH HSPLVVIIAD
LDDFKRINDD FGHPVGDRAL RAFSDLLRRE LRSIDLVARY GGEEFILLLP ETDENGGVQV
VERVRLLWSQ TTIATGQGVA RMTSSFGMAV YAEPFDGMSI DTLVARADEA LLCAKQAGKN
RLEIWQLQVE GGR
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