Gene RoseRS_1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1882 
Symbol 
ID5208842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2335149 
End bp2339417 
Gene Length4269 bp 
Protein Length1422 aa 
Translation table11 
GC content64% 
IMG OID640595490 
Producthypothetical protein 
Protein accessionYP_001276221 
Protein GI148656016 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATAC CATCTTCGAT CTATCCGTCG TTACGTCTTG AGGGCGGGTT GTTCAGTCCC 
GACCTGATCG AGGCGCTGAC CACCGCCGAT CTGCCGGGGC AGAAGCCGCC GGATTTTCGT
CTTCCGCCCG GTCGCAGCCT GACCGGTGAA ATCGCTGCGG CGTTCAACGA CGCCCGCGCG
CTCTGGCAGG TGTTTCAGAA CCGTCTGGAG CGTCTTCCCG CCGATGATCC GGCGACCTCT
GCGACCCGTG AGTTCTGGGT GATCCCGTTT CTGCGGCTGC TCGGCTATGA TCTGCGCTTC
AATTCGCGCG CGCTGGAGGT GGACGGCGCG CCGTTCCCCA TTTCTCATGC GCTCGGCGCC
GATCAGTCGC AGGATCATGC TGGCGCAGAA GCGCCTGTTC CGGTTCACAT TGTCGGTTGT
CGCCAGGAGT TGGGGCGCGT CGCTCCTGCC GCGCGCCCGC GCCTGTCGCC GCACGCCCTG
GTTCAGGAGT ACCTCAATCG CTCTGAGGCG CTGTGGGGAA TCGTCACCAA CGGGCGCACG
CTGCGCCTGC TGCGCAATTC GACGTTTGTG CGCCGCCAGG CGTATGTCGA GTTTGATCTG
GCGGCGATCT TCGCCGATGA GGGGCGGTTT GCCGATTTTG TGCTGCTCTA CCGCCTGCTG
CACCGCACCC GCCTGCCGTC TGACGGGCGC GCTCCCGCCG ATTGCCTGCT GGAGACCTAC
TATCAGCAGG CAGTCGAGCA GGGCGGGCGG GTGCGCGAGC GCCTGCGCGA TGGGGTGGAA
CAGGCGATTG TGATCCTGGC GAATGGCTTT TTGCGCCATC CCGCTTCGGT TGCGCTGCGC
GCGACGCTCC AGACCTGGCG CGGCGAGGGG GCGACCGCTT CCTCTTCTCC GTCGGAAGCG
GTTCACGCTG AGCATGTTCA GCGCCAGGGC GAGGGTGCGG ATGCGCTCTA CCACCAGTTG
TTGCGCCTGG TCTATCGCCT GCTCTTCCTG CTGACGGCGG AAGAGCGCGG ATTGATGGGC
GGCGACCCGC TCTACCGCGA TCACTACGGC GTGGGTCGCC TGCGCCGCCT GTGTACGCGC
CGCACTGCCT ACACCGATCA CGACGACCTG TGGCTGTCGT TGCGCGCGCT GTGGCTGGTG
CTGACCGATG AGCGCATGGC GCGCCTGCTG GATGCGCCGC CGCTCAATGG CGAACTCTTT
GCCCATCAGG AATTGGACGA CGCCAGCATC GCCAACCGCG ACCTGCTGCG CGCCTTCTGG
CATCTGGCGT TCTACCGCGA GGGGGATGCG CCGCCGCGCC GCGTCAACTA CGCCGCGCTG
GATACGGAGG AACTCGGTTC GGTGTACGAG AGCCTGCTCG ATTACCACCC CGCCATCACC
TTCGATACGC GCGGTCGCCC GACCTTTGTG TTGACCTTCG GCTCGGAACG GAAAGCGACC
GGCTCGTACT ACACGCCGCC GTCACTGGTG AACGAACTGG TGCAGAGCGC GCTGGCGCCG
GTGTTGGAGG AACGGTTGCG CCCGTGTCGA ACGGCGCGGG AAAAGGAAGC GGCGTTGCTC
GCGCTCAACG TGCTCGATCC GGCATGCGGC AGCGGCCATT TTCTGCTCGC CGCCGCCCGT
CGTCTGGGGA AGGAACTGGC GCGCATCCGC ACCGGCGAAG ACGAACCCGC CCCGGAGCGG
GTGCGCGAGG CGATCCGCGA CGTGGTTGCG CACTGCATCT ACGGCGTAGA CCGGAACCCG
CTGGCGGTTG AACTGGCGCG GGTGGCGCTC TGGCTCGAAT CGCACGCCGA AGGGAAGCCG
CTCACCTTCC TCGACCATCG GATCAAATGC GGCGACTCGC TGGTGGGGGT TCTCGACCTG
GAAGCGTTGC GCGAGGGGCT GCCTGATGAC GCCTTTGCGC CGGTCGTCGG CGATGACCGC
AAACTGGCGG CAAACCTCAA GCGCCGGAAC CGCACCGAGC GGGAAGGGCA ACTCACCCTC
TTCGACGCGC CGATCGACCA CGATCTGTCG CCGCTGGCAG AGACGGTGCG GCGCATCGAG
ACCATCCGCG ACGACACCCC CGATCAGGTG CATCGCAAAC GCGCAACCTA CGAAGCGTGG
CGCACCGACC CGCACCTGCG CCGGTTGAGC AACGCCTGCG ATCTGTGGAC GGCAGCGTTT
TTTCAGGCGC TCGCGCCTCA CCCCCGCCCG ACTGCGCCGG ACGCCCCCGC GTCGCCCGCG
CAGAACCCGG AGCGGATCAT CACCACCGAT GCCATTCGCC GCGTGCTTGC CGGTCAACCG
ATCGCAGCGA ACCTCCTGGG GGAAGCGCAG GCGCTCGCCG CCGAACATCG CTTCTTCCAC
TGGCCGCTGG AGTTCCCGGA GGTGTTTGCT TTTCACCCCC AGCCCCATCA AGGAGGAACG
GCGAGCGGAG GCTTCGACGT TGTTCTGGGC AACCCGCCCT GGGAGCGCAT CAAATTGCAG
GAAGAAGAGT TCTTCGCCGT CCGCGACCCG CAGATTGCCC GCGCCGCCAA CGCCGCTGCC
CGCAAACGGC TGATCGCCGC CCTGCCGCAG ACCAACCCCG CCCTGTGGGA AGCCTATCAG
CGCGCCCTGC ATGCCGCCGA AAGCGCCAGT CGCTTCCTGC GCGGCAGCGG ACAATACCCC
CTCACCGGGC GCGGCGACAT CAACACCTAC TCGGTCTTCG CCGAACGGGT GCGTAGCCTG
CTCAACGTCC GGGGGCGGGC GGGCATCATC GTCCCCACCG GCATCGCCAC CGACGCGACC
AACCAGTTCT TCTTCGCCGA TCTGGCAGAC AAGGGGCAAC TGGCAAGTCT GTTCGATTTT
GAGAACCGCC AGCGACTCTT TCCGGCAGTG GATAGCCGCA TGAAGTTCTG CCTCCTCACC
CTGGCAGGAT CGTGGCAACC GACGCCAGCC GGCGTGCGCG AAGCGGCGCC GATGGTCTTC
GCCTTCTTTG CCACCCACGC CGATCACCTG CGCGACCCGC GCCGTGTTTT CACCCTCACA
GCGGACGACA TTGCCCGCAT CAACCCCAAC ACCCGCACCC TGCCGGTCTT CCGCACCCGG
CAAGATGCCG ACCTGACTCG CGCCGTCTAT CGGCGTGTGC CGGTGTTGGT TAACGAACAC
ACGGGAGAAA ACCCCTGGGG CGTGCGCTTC CTGCGCATGT TCGATATGTC CAACGACTCG
CACCTCTTCC GCACACGGGC AGAATTGGAG CAGCAGGGGT ATCGGTTGGT GGGGAATCGA
TTGATAAAGG ATGGAAGTAT CTACCTGCCG ATGTATGAAG GAAGGCTGGG GTTTCAATTC
AATCATCGGT ATGCCACACA ACCTTCGGGT AATCTACAAG TCGTATCCCT GTCTCAACTC
CAGGAGGCTT GCTTTCTGGT AGAACCCCAA TTCTTTGTAG ATCAAAATGA CTTCAAGACA
CGGATGGGTC GCTTACGTCT CTCTTGTGTA ACAGGATTGC TGGGATACAG GCGTATTTCA
AACAATACCA ATGAGCGCAC TGTCGTTGCG AGTATTATTC CCTGGGGTCC GGCATCGTAT
GGTTGGATAC TCTCACTGGG TCCCGATGCC GCAGGTCTCT CTCTTCTGTG TGCTACCTAT
AATTCTCTGG TTTTTGATTA CCTTTTGAGG CAGTCCCTCA GTCAACCCAG TATTCCGCAA
TCTACCTTTG AGCAGGTCGC CGCACTTCCC CCCACCGCCT ACACCCCCGC CGATCTCGCC
TTCATTGTGC CGCGGGTGCT GGAACTGACC TATACCGCCT GGGACCTCAA GCCCTTCGCC
GACGATGTGT GGAACGAAGC CGATGACGAA CTGCGGGCAG CCATCCATGC TGCGTGGGAA
GCGAACCGTA TTGCTGCTGG CGGGCATGAA TGGCGCCTGC CATCCTGGAT CAGCGCTTAC
CCGGAGATCG AAGCCAACCC GCAGAAGGGC ATCCCCTTCC CGCCCTTCCG CTGGGACGAA
GACCGCCGCG CGGTGCTGCG CGCCGAACTC GATGCGTACT ACGCCCGGCT CTACGGTCTG
ACGCGCAAGC AACTGCGCTA CATCCTCGAC CCGGCGGATT TGACCGAACG CGAACTTGCC
GACATCCTCG ATCCGTGGGA AGAGGTGCGC GACCCGCTCG ACCCGGCGGG GTATGCCGCC
CGCGTCGCCG CCAGCACCTT CCCCGGCGAA ACCTTTCGCG TGCTGAAGGA GAAGGAACTG
CGTCAGTTCG GCGAATACCG CACGCGACGG CTGGTGCTGG AGGCGTGGGA GCAGCTGGAG
CGGCGTTGA
 
Protein sequence
MAIPSSIYPS LRLEGGLFSP DLIEALTTAD LPGQKPPDFR LPPGRSLTGE IAAAFNDARA 
LWQVFQNRLE RLPADDPATS ATREFWVIPF LRLLGYDLRF NSRALEVDGA PFPISHALGA
DQSQDHAGAE APVPVHIVGC RQELGRVAPA ARPRLSPHAL VQEYLNRSEA LWGIVTNGRT
LRLLRNSTFV RRQAYVEFDL AAIFADEGRF ADFVLLYRLL HRTRLPSDGR APADCLLETY
YQQAVEQGGR VRERLRDGVE QAIVILANGF LRHPASVALR ATLQTWRGEG ATASSSPSEA
VHAEHVQRQG EGADALYHQL LRLVYRLLFL LTAEERGLMG GDPLYRDHYG VGRLRRLCTR
RTAYTDHDDL WLSLRALWLV LTDERMARLL DAPPLNGELF AHQELDDASI ANRDLLRAFW
HLAFYREGDA PPRRVNYAAL DTEELGSVYE SLLDYHPAIT FDTRGRPTFV LTFGSERKAT
GSYYTPPSLV NELVQSALAP VLEERLRPCR TAREKEAALL ALNVLDPACG SGHFLLAAAR
RLGKELARIR TGEDEPAPER VREAIRDVVA HCIYGVDRNP LAVELARVAL WLESHAEGKP
LTFLDHRIKC GDSLVGVLDL EALREGLPDD AFAPVVGDDR KLAANLKRRN RTEREGQLTL
FDAPIDHDLS PLAETVRRIE TIRDDTPDQV HRKRATYEAW RTDPHLRRLS NACDLWTAAF
FQALAPHPRP TAPDAPASPA QNPERIITTD AIRRVLAGQP IAANLLGEAQ ALAAEHRFFH
WPLEFPEVFA FHPQPHQGGT ASGGFDVVLG NPPWERIKLQ EEEFFAVRDP QIARAANAAA
RKRLIAALPQ TNPALWEAYQ RALHAAESAS RFLRGSGQYP LTGRGDINTY SVFAERVRSL
LNVRGRAGII VPTGIATDAT NQFFFADLAD KGQLASLFDF ENRQRLFPAV DSRMKFCLLT
LAGSWQPTPA GVREAAPMVF AFFATHADHL RDPRRVFTLT ADDIARINPN TRTLPVFRTR
QDADLTRAVY RRVPVLVNEH TGENPWGVRF LRMFDMSNDS HLFRTRAELE QQGYRLVGNR
LIKDGSIYLP MYEGRLGFQF NHRYATQPSG NLQVVSLSQL QEACFLVEPQ FFVDQNDFKT
RMGRLRLSCV TGLLGYRRIS NNTNERTVVA SIIPWGPASY GWILSLGPDA AGLSLLCATY
NSLVFDYLLR QSLSQPSIPQ STFEQVAALP PTAYTPADLA FIVPRVLELT YTAWDLKPFA
DDVWNEADDE LRAAIHAAWE ANRIAAGGHE WRLPSWISAY PEIEANPQKG IPFPPFRWDE
DRRAVLRAEL DAYYARLYGL TRKQLRYILD PADLTERELA DILDPWEEVR DPLDPAGYAA
RVAASTFPGE TFRVLKEKEL RQFGEYRTRR LVLEAWEQLE RR