Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1882 |
Symbol | |
ID | 5208842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2335149 |
End bp | 2339417 |
Gene Length | 4269 bp |
Protein Length | 1422 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640595490 |
Product | hypothetical protein |
Protein accession | YP_001276221 |
Protein GI | 148656016 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGATAC CATCTTCGAT CTATCCGTCG TTACGTCTTG AGGGCGGGTT GTTCAGTCCC GACCTGATCG AGGCGCTGAC CACCGCCGAT CTGCCGGGGC AGAAGCCGCC GGATTTTCGT CTTCCGCCCG GTCGCAGCCT GACCGGTGAA ATCGCTGCGG CGTTCAACGA CGCCCGCGCG CTCTGGCAGG TGTTTCAGAA CCGTCTGGAG CGTCTTCCCG CCGATGATCC GGCGACCTCT GCGACCCGTG AGTTCTGGGT GATCCCGTTT CTGCGGCTGC TCGGCTATGA TCTGCGCTTC AATTCGCGCG CGCTGGAGGT GGACGGCGCG CCGTTCCCCA TTTCTCATGC GCTCGGCGCC GATCAGTCGC AGGATCATGC TGGCGCAGAA GCGCCTGTTC CGGTTCACAT TGTCGGTTGT CGCCAGGAGT TGGGGCGCGT CGCTCCTGCC GCGCGCCCGC GCCTGTCGCC GCACGCCCTG GTTCAGGAGT ACCTCAATCG CTCTGAGGCG CTGTGGGGAA TCGTCACCAA CGGGCGCACG CTGCGCCTGC TGCGCAATTC GACGTTTGTG CGCCGCCAGG CGTATGTCGA GTTTGATCTG GCGGCGATCT TCGCCGATGA GGGGCGGTTT GCCGATTTTG TGCTGCTCTA CCGCCTGCTG CACCGCACCC GCCTGCCGTC TGACGGGCGC GCTCCCGCCG ATTGCCTGCT GGAGACCTAC TATCAGCAGG CAGTCGAGCA GGGCGGGCGG GTGCGCGAGC GCCTGCGCGA TGGGGTGGAA CAGGCGATTG TGATCCTGGC GAATGGCTTT TTGCGCCATC CCGCTTCGGT TGCGCTGCGC GCGACGCTCC AGACCTGGCG CGGCGAGGGG GCGACCGCTT CCTCTTCTCC GTCGGAAGCG GTTCACGCTG AGCATGTTCA GCGCCAGGGC GAGGGTGCGG ATGCGCTCTA CCACCAGTTG TTGCGCCTGG TCTATCGCCT GCTCTTCCTG CTGACGGCGG AAGAGCGCGG ATTGATGGGC GGCGACCCGC TCTACCGCGA TCACTACGGC GTGGGTCGCC TGCGCCGCCT GTGTACGCGC CGCACTGCCT ACACCGATCA CGACGACCTG TGGCTGTCGT TGCGCGCGCT GTGGCTGGTG CTGACCGATG AGCGCATGGC GCGCCTGCTG GATGCGCCGC CGCTCAATGG CGAACTCTTT GCCCATCAGG AATTGGACGA CGCCAGCATC GCCAACCGCG ACCTGCTGCG CGCCTTCTGG CATCTGGCGT TCTACCGCGA GGGGGATGCG CCGCCGCGCC GCGTCAACTA CGCCGCGCTG GATACGGAGG AACTCGGTTC GGTGTACGAG AGCCTGCTCG ATTACCACCC CGCCATCACC TTCGATACGC GCGGTCGCCC GACCTTTGTG TTGACCTTCG GCTCGGAACG GAAAGCGACC GGCTCGTACT ACACGCCGCC GTCACTGGTG AACGAACTGG TGCAGAGCGC GCTGGCGCCG GTGTTGGAGG AACGGTTGCG CCCGTGTCGA ACGGCGCGGG AAAAGGAAGC GGCGTTGCTC GCGCTCAACG TGCTCGATCC GGCATGCGGC AGCGGCCATT TTCTGCTCGC CGCCGCCCGT CGTCTGGGGA AGGAACTGGC GCGCATCCGC ACCGGCGAAG ACGAACCCGC CCCGGAGCGG GTGCGCGAGG CGATCCGCGA CGTGGTTGCG CACTGCATCT ACGGCGTAGA CCGGAACCCG CTGGCGGTTG AACTGGCGCG GGTGGCGCTC TGGCTCGAAT CGCACGCCGA AGGGAAGCCG CTCACCTTCC TCGACCATCG GATCAAATGC GGCGACTCGC TGGTGGGGGT TCTCGACCTG GAAGCGTTGC GCGAGGGGCT GCCTGATGAC GCCTTTGCGC CGGTCGTCGG CGATGACCGC AAACTGGCGG CAAACCTCAA GCGCCGGAAC CGCACCGAGC GGGAAGGGCA ACTCACCCTC TTCGACGCGC CGATCGACCA CGATCTGTCG CCGCTGGCAG AGACGGTGCG GCGCATCGAG ACCATCCGCG ACGACACCCC CGATCAGGTG CATCGCAAAC GCGCAACCTA CGAAGCGTGG CGCACCGACC CGCACCTGCG CCGGTTGAGC AACGCCTGCG ATCTGTGGAC GGCAGCGTTT TTTCAGGCGC TCGCGCCTCA CCCCCGCCCG ACTGCGCCGG ACGCCCCCGC GTCGCCCGCG CAGAACCCGG AGCGGATCAT CACCACCGAT GCCATTCGCC GCGTGCTTGC CGGTCAACCG ATCGCAGCGA ACCTCCTGGG GGAAGCGCAG GCGCTCGCCG CCGAACATCG CTTCTTCCAC TGGCCGCTGG AGTTCCCGGA GGTGTTTGCT TTTCACCCCC AGCCCCATCA AGGAGGAACG GCGAGCGGAG GCTTCGACGT TGTTCTGGGC AACCCGCCCT GGGAGCGCAT CAAATTGCAG GAAGAAGAGT TCTTCGCCGT CCGCGACCCG CAGATTGCCC GCGCCGCCAA CGCCGCTGCC CGCAAACGGC TGATCGCCGC CCTGCCGCAG ACCAACCCCG CCCTGTGGGA AGCCTATCAG CGCGCCCTGC ATGCCGCCGA AAGCGCCAGT CGCTTCCTGC GCGGCAGCGG ACAATACCCC CTCACCGGGC GCGGCGACAT CAACACCTAC TCGGTCTTCG CCGAACGGGT GCGTAGCCTG CTCAACGTCC GGGGGCGGGC GGGCATCATC GTCCCCACCG GCATCGCCAC CGACGCGACC AACCAGTTCT TCTTCGCCGA TCTGGCAGAC AAGGGGCAAC TGGCAAGTCT GTTCGATTTT GAGAACCGCC AGCGACTCTT TCCGGCAGTG GATAGCCGCA TGAAGTTCTG CCTCCTCACC CTGGCAGGAT CGTGGCAACC GACGCCAGCC GGCGTGCGCG AAGCGGCGCC GATGGTCTTC GCCTTCTTTG CCACCCACGC CGATCACCTG CGCGACCCGC GCCGTGTTTT CACCCTCACA GCGGACGACA TTGCCCGCAT CAACCCCAAC ACCCGCACCC TGCCGGTCTT CCGCACCCGG CAAGATGCCG ACCTGACTCG CGCCGTCTAT CGGCGTGTGC CGGTGTTGGT TAACGAACAC ACGGGAGAAA ACCCCTGGGG CGTGCGCTTC CTGCGCATGT TCGATATGTC CAACGACTCG CACCTCTTCC GCACACGGGC AGAATTGGAG CAGCAGGGGT ATCGGTTGGT GGGGAATCGA TTGATAAAGG ATGGAAGTAT CTACCTGCCG ATGTATGAAG GAAGGCTGGG GTTTCAATTC AATCATCGGT ATGCCACACA ACCTTCGGGT AATCTACAAG TCGTATCCCT GTCTCAACTC CAGGAGGCTT GCTTTCTGGT AGAACCCCAA TTCTTTGTAG ATCAAAATGA CTTCAAGACA CGGATGGGTC GCTTACGTCT CTCTTGTGTA ACAGGATTGC TGGGATACAG GCGTATTTCA AACAATACCA ATGAGCGCAC TGTCGTTGCG AGTATTATTC CCTGGGGTCC GGCATCGTAT GGTTGGATAC TCTCACTGGG TCCCGATGCC GCAGGTCTCT CTCTTCTGTG TGCTACCTAT AATTCTCTGG TTTTTGATTA CCTTTTGAGG CAGTCCCTCA GTCAACCCAG TATTCCGCAA TCTACCTTTG AGCAGGTCGC CGCACTTCCC CCCACCGCCT ACACCCCCGC CGATCTCGCC TTCATTGTGC CGCGGGTGCT GGAACTGACC TATACCGCCT GGGACCTCAA GCCCTTCGCC GACGATGTGT GGAACGAAGC CGATGACGAA CTGCGGGCAG CCATCCATGC TGCGTGGGAA GCGAACCGTA TTGCTGCTGG CGGGCATGAA TGGCGCCTGC CATCCTGGAT CAGCGCTTAC CCGGAGATCG AAGCCAACCC GCAGAAGGGC ATCCCCTTCC CGCCCTTCCG CTGGGACGAA GACCGCCGCG CGGTGCTGCG CGCCGAACTC GATGCGTACT ACGCCCGGCT CTACGGTCTG ACGCGCAAGC AACTGCGCTA CATCCTCGAC CCGGCGGATT TGACCGAACG CGAACTTGCC GACATCCTCG ATCCGTGGGA AGAGGTGCGC GACCCGCTCG ACCCGGCGGG GTATGCCGCC CGCGTCGCCG CCAGCACCTT CCCCGGCGAA ACCTTTCGCG TGCTGAAGGA GAAGGAACTG CGTCAGTTCG GCGAATACCG CACGCGACGG CTGGTGCTGG AGGCGTGGGA GCAGCTGGAG CGGCGTTGA
|
Protein sequence | MAIPSSIYPS LRLEGGLFSP DLIEALTTAD LPGQKPPDFR LPPGRSLTGE IAAAFNDARA LWQVFQNRLE RLPADDPATS ATREFWVIPF LRLLGYDLRF NSRALEVDGA PFPISHALGA DQSQDHAGAE APVPVHIVGC RQELGRVAPA ARPRLSPHAL VQEYLNRSEA LWGIVTNGRT LRLLRNSTFV RRQAYVEFDL AAIFADEGRF ADFVLLYRLL HRTRLPSDGR APADCLLETY YQQAVEQGGR VRERLRDGVE QAIVILANGF LRHPASVALR ATLQTWRGEG ATASSSPSEA VHAEHVQRQG EGADALYHQL LRLVYRLLFL LTAEERGLMG GDPLYRDHYG VGRLRRLCTR RTAYTDHDDL WLSLRALWLV LTDERMARLL DAPPLNGELF AHQELDDASI ANRDLLRAFW HLAFYREGDA PPRRVNYAAL DTEELGSVYE SLLDYHPAIT FDTRGRPTFV LTFGSERKAT GSYYTPPSLV NELVQSALAP VLEERLRPCR TAREKEAALL ALNVLDPACG SGHFLLAAAR RLGKELARIR TGEDEPAPER VREAIRDVVA HCIYGVDRNP LAVELARVAL WLESHAEGKP LTFLDHRIKC GDSLVGVLDL EALREGLPDD AFAPVVGDDR KLAANLKRRN RTEREGQLTL FDAPIDHDLS PLAETVRRIE TIRDDTPDQV HRKRATYEAW RTDPHLRRLS NACDLWTAAF FQALAPHPRP TAPDAPASPA QNPERIITTD AIRRVLAGQP IAANLLGEAQ ALAAEHRFFH WPLEFPEVFA FHPQPHQGGT ASGGFDVVLG NPPWERIKLQ EEEFFAVRDP QIARAANAAA RKRLIAALPQ TNPALWEAYQ RALHAAESAS RFLRGSGQYP LTGRGDINTY SVFAERVRSL LNVRGRAGII VPTGIATDAT NQFFFADLAD KGQLASLFDF ENRQRLFPAV DSRMKFCLLT LAGSWQPTPA GVREAAPMVF AFFATHADHL RDPRRVFTLT ADDIARINPN TRTLPVFRTR QDADLTRAVY RRVPVLVNEH TGENPWGVRF LRMFDMSNDS HLFRTRAELE QQGYRLVGNR LIKDGSIYLP MYEGRLGFQF NHRYATQPSG NLQVVSLSQL QEACFLVEPQ FFVDQNDFKT RMGRLRLSCV TGLLGYRRIS NNTNERTVVA SIIPWGPASY GWILSLGPDA AGLSLLCATY NSLVFDYLLR QSLSQPSIPQ STFEQVAALP PTAYTPADLA FIVPRVLELT YTAWDLKPFA DDVWNEADDE LRAAIHAAWE ANRIAAGGHE WRLPSWISAY PEIEANPQKG IPFPPFRWDE DRRAVLRAEL DAYYARLYGL TRKQLRYILD PADLTERELA DILDPWEEVR DPLDPAGYAA RVAASTFPGE TFRVLKEKEL RQFGEYRTRR LVLEAWEQLE RR
|
| |