| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1853 |
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| Symbol | |
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| ID | 5208813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2288788 |
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| End bp | 2289747 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640595461 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001276192 |
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| Protein GI | 148655987 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.669064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGC TGATCACCGG CATCAATGGA TTCGTTGGCG GGCACCTGGC TGAGCATCTC
CTCTCCAGTG GCTTGTGGGA GGTCGCTGGC ATTGCGCGGC AGCCAGCGCT CGCCCTGGAA
ACCCTCACCG GACGGGTGAC CTATGTCGCC GCCGATCTCA GCGACCGCGA ACAAACCCTG
AGAGCGCTTG CCAGTATCCG ACCCGACGTC ATCTTCCACC TCGCCGGTCA ATCGAACGTC
CCGCACGCAT TCGCCGACCC GCACACCACG GTTCAGATGA ATATCGGCGC ACAGCTCAAC
CTGTTTCTCA GTGTGCTGCA ACTGCGGATC GACCCGCTGA TCATCGTTGC CAGCAGCAAC
GAGATCTATG GGTTGGTGCG CCCTGAAGAC CTGCCGGTCA ACGAACAAAC GCCGCTGCGC
CCGGTTAACC CATATGCCGT GAGTAAAGCG GCGCAAGACC TGTTTGCCTA CCAGTACCAT
ATCAGTCACC GGATGCGCAC CGTCCGCCTC CGACCGTTCA ACCATATTGG TCCGCGTCAG
ACGGAAGCGT TCGTTGTACC GGCGTTCGCC GCGCAGATCG CGAGGATCGA AGCCGGACTG
CAACCACCGG TGCTGCGCGT CGGCAATCTG GCGGCGGAAC GTGATTTCAG CGATGTGCGC
GATATTGTCC GCGCCTATGA ACTCGCTGCA CTGCACGGCG AAGTCGGCGC GGCGTACAAC
GTCGGCAGCG GGCAGGCAGT CGGCGTGCAG CGCATTCTGG ACATTCTGCT GACCTTCAGC
ACGCACGATA TTCAGATCGA ACCGGATCCA TCCCGGATGC GCCCCTCCGA TGTGCCGCGC
GTGGTGTGCG ACGCATCGCG ATTCCACGCC GATACCGGAT GGACGCCGCG CATTCCGCTG
GAACAGACCC TGTTCGACAC GCTTGAGTAC TGGCGTTTCC GGGTACAGGA GCAGTTATGA
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| Protein sequence | MRALITGING FVGGHLAEHL LSSGLWEVAG IARQPALALE TLTGRVTYVA ADLSDREQTL
RALASIRPDV IFHLAGQSNV PHAFADPHTT VQMNIGAQLN LFLSVLQLRI DPLIIVASSN
EIYGLVRPED LPVNEQTPLR PVNPYAVSKA AQDLFAYQYH ISHRMRTVRL RPFNHIGPRQ
TEAFVVPAFA AQIARIEAGL QPPVLRVGNL AAERDFSDVR DIVRAYELAA LHGEVGAAYN
VGSGQAVGVQ RILDILLTFS THDIQIEPDP SRMRPSDVPR VVCDASRFHA DTGWTPRIPL
EQTLFDTLEY WRFRVQEQL
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