Gene RoseRS_1851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1851 
Symbol 
ID5208811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand- 
Start bp2286549 
End bp2287592 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content59% 
IMG OID640595459 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001276190 
Protein GI148655985 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTG TCGCAATCAA CGGCTTCGGT CGGATCGGCC GCCAGAGCTT CAAAGCAATG 
CTCGAGCACT ACCCGGACGA CCTGGAGATC GTGGCAATAA ACGACCTGAC CGATAATGAA 
ACACTGGCGC ATCTGTTGCG CCACGACTCG ACGTATGGCG CGTTCGATGG CGATGTCAGC 
GTAACCAGCG ACCGGATCAG CGTAACGTTC TACAGCGAAG AAGGGGATGA ACGTCAGATC 
GACATTGTGG CGCTGGAGGA GCGTGACCCG GCGAAACTGC CGTGGCGCGA CCTGGGCATC 
GACATTGTGA TCGAGTCGAC CGGGCGCTTC ACCGAGGCGG AGAAGGCGCG TGCGCACCTC 
CAGGCGGGCG CGCGCAAGGT TATCATCACG GCGCCTGCTA AGGGCGAGGA CATTACCATC 
TGCCTGGGCG TCAACGAAGA TCGCTACGAT AACGCTGTCC ACCATATCAT CTCCAACGCC 
TCCTGCACCA CCAACTGTCT GGCGCCGGTG GCAAAGGTGC TCAACGACAA TTTCGGCATC 
CGTCGCGGGA TGATGACAAC GGTTCATTCC TATACCATGG ATCAGAACCT GCAGGACAAT 
GTGCACAAAG ACCTGCGACG TGCGCGGGCG GCTGCAATGA ACATCGTACC GACAACTACC 
GGTGCAGCGC GGGCGGTGGC GCTCGTGATT CCCGAACTCA AAGGCAAGTT CGATGGGTTT 
GCCGTGCGCG TGCCGACGCC AACCGTCTCA ATGATCGACT TCGTGGTCGA ACTGGAGCGC 
ACCGTCTCGG TCGATGAAGT GAACGAAACG TTCCGCGAAG CGGCGCAGAG TAAGGAACTG 
GAAGGCATTC TGGAAGTGAC CGACGAGGAA CTGGTATCGA GCGACTTTAT CGGCTCCACT 
GCGTCGGCGA TTGTCGATCT GCCGCTCACA ATGGCGCTGG GGGGCAATCT GATCAAGGTC 
ATTGCCTGGT ACGATAATGA GTGGGGGTAC GCAACCCGTG TCGCCGACCT GACAGCGTTC 
ATCGCCGATG AAATGGAGGT GTAG
 
Protein sequence
MARVAINGFG RIGRQSFKAM LEHYPDDLEI VAINDLTDNE TLAHLLRHDS TYGAFDGDVS 
VTSDRISVTF YSEEGDERQI DIVALEERDP AKLPWRDLGI DIVIESTGRF TEAEKARAHL 
QAGARKVIIT APAKGEDITI CLGVNEDRYD NAVHHIISNA SCTTNCLAPV AKVLNDNFGI 
RRGMMTTVHS YTMDQNLQDN VHKDLRRARA AAMNIVPTTT GAARAVALVI PELKGKFDGF 
AVRVPTPTVS MIDFVVELER TVSVDEVNET FREAAQSKEL EGILEVTDEE LVSSDFIGST 
ASAIVDLPLT MALGGNLIKV IAWYDNEWGY ATRVADLTAF IADEMEV