Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1820 |
Symbol | |
ID | 5208779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2246302 |
End bp | 2247429 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640595428 |
Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
Protein accession | YP_001276160 |
Protein GI | 148655955 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0373364 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAATA CTATGATTGG CATTCTGGGC GGCGGGCAGT TGGGGCGTAT GCTGGCACTT GCTGGCTATC CGCTCGGTCT GCGCTTCCGC TTCTTCGATC CTTCCGCCGA TGCGCCGGTT CGCTACCTGG CGGAACAGGT TGTCGCCCCC TATGATGACC ATCTGGCGCT GGATCAGTTC AGCCATGGGT TAACGGTGGC GACGTATGAG TTCGAGAATG TGCCGGTAAC AACGGCACGC GCACTTGAGC GGCGCATACC GGTGTTTCCG CCGCCGCAGG CGCTTGAGGC AGCGCAGGAT CGTCTCCAGG AAAAACGCTT CTTCGCAAGC CTGAACATTC CAACCACGCC TTTCGCGCCG GTGGATGATC GCGAGTCGCT TGAGGCAGCC GTTGTGCATA TCGGACTCCC TGCCGTTCTG AAGACGCGAC GCCTGGGGTA TGACGGAAAA GGTCAGGTGA TTCTCCATAC CCACACCGAC GTTGATCCCG CCTGGCACGC ACTCGGCGGG CAACCGTTGA TCCTCGAAAA GTTCATCGCG TTCGACCGCG AACTATCGGT GCTGGCGGTA CGCGGACAGG ACGGCGGCAT CGCGTGCTAT CCGCTGGTCG AAAATGTTCA CCGGAACGGC ATCCTGCACC GCTCGATCGC GCCAGCGCCC GGACTTGCAG CCGAAACGCA GATGCTGGCA GAGACGTATG CGCGCCGTGT TCTCGAAGCC CTCGATTATA TCGGCGTGCT GGCGATTGAA CTGTTTGAAA TCGACGAAAC GAACGCGCGC GCAACAGGCG CTCGCCTGCT GGCAAACGAA ATGGCGCCGC GCGTGCACAA CTCCGGTCAC TGGACGATTG AGGGAGCAGT CACAAGTCAG TTCGAGAACC ATGTGCGGGC AATCGTCGGT CTGCCAACTG GCGCCACCTC AGCGCGAGGG TATGCGGCGA TGGTCAATCT GATCGACAGT CTGCCCGATA TAACCATGCT GCTGGCGCTG CCGGACACGC ACGTGCATCT CTACGACAAA GCGCCGCGAC CGGGTCGCAA ACTGGGGCAT GTGACCATCT GCGCCGGGGA TGTGACACAA CTGGCAGATC GATTGGCGGT TGTGGAACGG TATGTTCTGG CATGTTGA
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Protein sequence | MNNTMIGILG GGQLGRMLAL AGYPLGLRFR FFDPSADAPV RYLAEQVVAP YDDHLALDQF SHGLTVATYE FENVPVTTAR ALERRIPVFP PPQALEAAQD RLQEKRFFAS LNIPTTPFAP VDDRESLEAA VVHIGLPAVL KTRRLGYDGK GQVILHTHTD VDPAWHALGG QPLILEKFIA FDRELSVLAV RGQDGGIACY PLVENVHRNG ILHRSIAPAP GLAAETQMLA ETYARRVLEA LDYIGVLAIE LFEIDETNAR ATGARLLANE MAPRVHNSGH WTIEGAVTSQ FENHVRAIVG LPTGATSARG YAAMVNLIDS LPDITMLLAL PDTHVHLYDK APRPGRKLGH VTICAGDVTQ LADRLAVVER YVLAC
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