Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1815 |
Symbol | |
ID | 5208774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2241047 |
End bp | 2242027 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640595423 |
Product | ABC transporter related |
Protein accession | YP_001276155 |
Protein GI | 148655950 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0121521 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTCA TTATTGCCGA TCGACTGACG AAAACGTTTC CTGGCGAGAC TCGTCCGGCA GTCGATCAGG TCTCGTTCGA GATCAAACAG GGTGAGTTCG TTGTTTTGCT GGGACCGTCC GGTTGCGGCA AGACGACGCT GCTCAAAATG ATCAACCGCC TCTACGAGCC GACATCCGGA CGCCTGTTGA TCGACGGAGT CGATGTGCGT TCGATGCCGG CAACTGCGTT GCGCCGTCGC ATCGGGTATG TCATCCAGCA GACGGGGCTG TTCCCCCATC TGCGCATCGA ACAGAACATC GCCGTCGTTC CACAACTGCT CCGCTGGGAT CGCGCGCGGA TCGAGGCGCG GATCGACGAA TTGCTCGACC TGGTGGAACT GCCGCGTTCC TACCGCCGTC GCTACCCGCG GCAGTTATCC GGGGGCGAAC AGCAGCGTGT CGGTCTGGCG CGCGCACTTG CCGCAGACCC TTCGCTGATG CTCATGGACG AACCTTTTGG CGCGCTCGAT GCGATTACCC GCGCCCGGCT CCAGGAAGAG TTGTTGCGCA TTCAGCAGCG TCTCCACAAA ACGATCCTGT TCGTGACGCA CGATGTCGAT GAAGCGCTGC GCCTGGCGGA TCGACTGCTG ATCATGCGCG CCGGGCGCAT TGTACAGTTC GATACGCCGC TGGCAGTGCT GGCGGAACCG GCGGACGACT TTGTGCGTGA CCTGCTCGGC GCCGACGATG TGCTGCGGCG TCTCAGTTTG CTCACTGTCG CCGATGCGCT TGCCAGCGAC GGTATGAATG GCGATCACAC CGCTCACGGG AGCCAGGAGA CATTGAATCC TGGCGATAAT CTGCGCGAGG CGCTTATCCG CATGCTGCGA TCCGGCGGGC AACCGCTGCC GGTGGTTGAC AATGGTCGGC AGTTAGGGCG GATTTCGCCC GACACGATCG CTGCCGCGCT GACGCGCAAA ACCCATGCGC TACCTGATTG A
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Protein sequence | MAFIIADRLT KTFPGETRPA VDQVSFEIKQ GEFVVLLGPS GCGKTTLLKM INRLYEPTSG RLLIDGVDVR SMPATALRRR IGYVIQQTGL FPHLRIEQNI AVVPQLLRWD RARIEARIDE LLDLVELPRS YRRRYPRQLS GGEQQRVGLA RALAADPSLM LMDEPFGALD AITRARLQEE LLRIQQRLHK TILFVTHDVD EALRLADRLL IMRAGRIVQF DTPLAVLAEP ADDFVRDLLG ADDVLRRLSL LTVADALASD GMNGDHTAHG SQETLNPGDN LREALIRMLR SGGQPLPVVD NGRQLGRISP DTIAAALTRK THALPD
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