| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1786 |
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| Symbol | |
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| ID | 5208745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2206959 |
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| End bp | 2208347 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640595394 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_001276126 |
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| Protein GI | 148655921 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00355982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCGCTCT ACACCATTGA TCATCAGGCA ATCTATCTTG AAGAGAGCGG CCCGGAGAAT
GCACCATATG CATTTCTCAT CCATGGATGG GCGAGTTCGT CATACACATG GAAACCGATC
CTGCCCGCCT TGAGTCGCCG CTATCGATGC ATTGCAATTG ATCTGCCGGG TTTCGGACGT
TCGCCCGTAC CGTTGCATCC GCCGACAATC CCGTGGTATG CAGACCTTGT TGCGCGCCTG
ATCGATTATT TCAGTCCCAA TCAACCAGTG CTGTTGCTCG GTCACTCGAT GGGCGGGCAG
ATCGGGGCAA CCCTGGCGTT GCACTATCCG CTGATCGTCG AACGCATGGT GCTGCTCAAC
CCGGCGCTCA GCGGGCGACT GTCAACCCGC GTGAATCTCC TGATCGGTCC GCATGTCCTG
GCGGAACGAT TCCTTCCGCT TGAGTGGTTA TTGCACCTGC TCGCCAGAAC ACCGCTCGAT
TATACCGATT ATCTGCTCAA GCCATCGAAC TTTGCCGAGC GCGCACAGGT TTCAGACGAG
GATTATCAAC GTATTCGCGC CGACGCTCGT CGTCCCGGTC AGGGACGAAT GCGCGCCGCC
TGCTTTCAAG CCATGCGACA GGGTGATCTG CGGGGAAAGC TGGCAGCAGT CGAACCGCCG
GCTCTGGTGA TCTGGGGCGC TGAGGATAAC ATTGTGCCGC TGCGCGATGC GGGAGTTGTC
GCTGCCGAGT GGCCCGCCGC CGACCTGCGG ATCGTCCCAA ACGCCGGTCA CTGGCCCCAA
TTCGAGCAAC CTGATGCAAC CCTGCGGCAT ATTGCGCTCT TCCTGGGCTT GCCGCCTGCG
GGTGCGGCGC TCCCAGCCGA TGCGCGCAAT ATCGATGAAC TGCGGGCGAT TGCCCAATTC
CTCAACAACT CGGAGATCGG CAGTCACCTC AACGAAGCGC AGCGCATGCG CGTTGCATCA
CTGCTCCAGC GACGGGTGCT TGCGCCGCGC GAGCGCCTCG CCGCCGCCGG TTCGCGCAGC
GAAGAGATGT ATATCGTTCA GGACGGATTG CTCGAAGTCT GGATCAATCC GGTTCAGATC
GGCGGGGTAC ACCAGCCTCC GGTACGGATC GCCTTCATGC AAGCCGGTCA GGTTGCCGGA
GAGTTGGGGT TGCTCGAAGA TGCAGAGCGC AGCGCCGACC TGCGCGCCGG TGATCAGTCA
ACGGTTGTGC TGGTGCTGAC TCGTGAGGCG CTGCATACGC TGGCTGAGGA TGATCCGGCG
CTGGGGATGC GCCTCATGCA GAATCTGGCA GTCTCGCTTG GACGTCGCCT CCGCCACCAG
AACTGGCTGG CGCAGCGCCT CGAACAGCGC TCATTGCTGG GTGGCAGCGT GACGCGGTTG
CTGGAGTGA
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| Protein sequence | MALYTIDHQA IYLEESGPEN APYAFLIHGW ASSSYTWKPI LPALSRRYRC IAIDLPGFGR
SPVPLHPPTI PWYADLVARL IDYFSPNQPV LLLGHSMGGQ IGATLALHYP LIVERMVLLN
PALSGRLSTR VNLLIGPHVL AERFLPLEWL LHLLARTPLD YTDYLLKPSN FAERAQVSDE
DYQRIRADAR RPGQGRMRAA CFQAMRQGDL RGKLAAVEPP ALVIWGAEDN IVPLRDAGVV
AAEWPAADLR IVPNAGHWPQ FEQPDATLRH IALFLGLPPA GAALPADARN IDELRAIAQF
LNNSEIGSHL NEAQRMRVAS LLQRRVLAPR ERLAAAGSRS EEMYIVQDGL LEVWINPVQI
GGVHQPPVRI AFMQAGQVAG ELGLLEDAER SADLRAGDQS TVVLVLTREA LHTLAEDDPA
LGMRLMQNLA VSLGRRLRHQ NWLAQRLEQR SLLGGSVTRL LE
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