Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1772 |
Symbol | |
ID | 5208729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2189353 |
End bp | 2190048 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640595378 |
Product | hypothetical protein |
Protein accession | YP_001276112 |
Protein GI | 148655907 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.407848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0745731 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTCCC CCCGCAAATC AGGCGAACCC GCCCGTCCCG AAGCGACTGT TTCACGCACC TATCGTGCGG CGATCCGCAT TGGCGAAGAC TATGTCACCC TCGAAGAAAC AATCGTCCTG CCGCTCGACG CCAGCGACGA AGAGGTGGCA AAAGCCGTTG ATCTCGGCTG GCGCATCTAT CGCACCCAAC GTGAGGCGAT TGAAGCGCAG ATCGCTGGCA TCCGCGAAGC GCAACCCGCG CCGCCAGCGC CCACGATCCG CGACCCCGAC GCTCCCGCGA GCGACCGTCA ACGGCACTAC ATCGCCGCCC TCCAGGAAGA CCTCGCCTGG ACGAACGAGC AACTGGCATC CTACGCCCAG GAACACCACG TCGATCTGGT CACGATGACC AAAGGACAGG CAAGCGCCTT CATCGACAGT CTGAAAAAGA TTGCCGAGGA ACGTCAGGCA TACGCAGCGG CTGCACGCAG CGCACACGCT GACGATGGCG CCATTCCCGC GCGTCCTTCC GATACGGCGC CTGCCCACGA GAAGCAGATT GCTGCGCTCA GGCGGCTGGC GCAGCAAAAG GGGTTCGATC TCGATGCCGA GATCCGGCAG CGCTTCGAGA CCACCGTCGA GGAACTCACC AGCGGACAGG CGTCGGCGCT GCTGCGCGAG TGGCAGCGCC CCAGCCAGCG CACGGCTGGC GAATGA
|
Protein sequence | MASPRKSGEP ARPEATVSRT YRAAIRIGED YVTLEETIVL PLDASDEEVA KAVDLGWRIY RTQREAIEAQ IAGIREAQPA PPAPTIRDPD APASDRQRHY IAALQEDLAW TNEQLASYAQ EHHVDLVTMT KGQASAFIDS LKKIAEERQA YAAAARSAHA DDGAIPARPS DTAPAHEKQI AALRRLAQQK GFDLDAEIRQ RFETTVEELT SGQASALLRE WQRPSQRTAG E
|
| |