Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1761 |
Symbol | |
ID | 5208718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2177780 |
End bp | 2178736 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640595367 |
Product | putative transmembrane anti-sigma factor |
Protein accession | YP_001276101 |
Protein GI | 148655896 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.446242 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCGC CAATGACATT GTCGAACTGC GATGAGATCC TGGAACTCGT TCCTGCGTTT GTGCTGGGCG CGCTCGATGC GGACGAAGCC GCACGAGTGG CAGCACATAT CACCAACTGC CCCCGCTGTC GCGCCGAAGC GGAGTCGTTC CGCGATGTCG TCGGGTTGTT GCCCTATGCG TCCGGGGCGC TCACCCCCCC GCCGCGAGTC AAACGTCAAC TTTTTGCGCG TATTGCCGCC GCACATGATG ATGCTTCCAC CGAAACCGCA CCAGCGTCGC GCCCAATGGC GATGCCCCGT TCTACCCGTC CAGGTCGCTG GGTTTTGCCA GCATTCGCAG CGATGCTGGC GCTGATTATC GGTCTGGGAA CAGCGGCATT CGAGGCGCGC GGACGCGCTG ACCGGCTTGC AGTGCAACTC GCATCCAATC AGCAGATGCT GCGTTCGATG GAGCTGCAGA TAGCCGAGGT GCGCCAGACT GCGACGATAG TAGAGGCGCA ACTGCGTGCC AGTGTGCGAG AACTTGATGA GACCCGCCTT CAACTCGCAA AGAGCCAGCA GGAAATCCAG GCGTTGAGAA CATCAGAGCG ACAGGATGAA CAACTCGTTT CGTTCATTGC TGCGCCGCAG ACCGTCTCGC GGCCGCTGGG AACGACTGAG CGCGCTCCTG ATGATGCAAG CGCGCGCATG TTCATGCAAC CGGGGCATAA TCGCCTGGTG CTGATGATTT ATGGGCTGAA ATCCGCCGAA CCGGGGAAAC TTTATCGGTT GTGGCTGGCG AAAGGAAATC AGCCAATCGC TATCGGCGTC GTTACGGTTG GACCTGATGG GGTCGCCGAA TTTGTGGTCG ATGCGCCGGA ACCGATGGAC GCCTATGACC AGGTGATGAT TACGCTGGAC GAAGTCGATA CTGCTGCTCA ACCCAGCGAA GAAGTCATCT TCGAGGCGAA TCTGTAG
|
Protein sequence | MSAPMTLSNC DEILELVPAF VLGALDADEA ARVAAHITNC PRCRAEAESF RDVVGLLPYA SGALTPPPRV KRQLFARIAA AHDDASTETA PASRPMAMPR STRPGRWVLP AFAAMLALII GLGTAAFEAR GRADRLAVQL ASNQQMLRSM ELQIAEVRQT ATIVEAQLRA SVRELDETRL QLAKSQQEIQ ALRTSERQDE QLVSFIAAPQ TVSRPLGTTE RAPDDASARM FMQPGHNRLV LMIYGLKSAE PGKLYRLWLA KGNQPIAIGV VTVGPDGVAE FVVDAPEPMD AYDQVMITLD EVDTAAQPSE EVIFEANL
|
| |