| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1748 |
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| Symbol | |
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| ID | 5208705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2160797 |
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| End bp | 2161843 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640595354 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001276088 |
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| Protein GI | 148655883 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.489043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.975855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACATT CACGTTTTCT GGCGGCGTGT CGTCGTCAGC CTGTTGATGC CACGCCGGTC
TGGTTTATGC GTCAGGCGGG GCGCTATATG CCGGAGTATC GCGCGATCCG CGAGCGTTAC
GGCTTTCTGG AGATGGTGAA AACGCCTGAA CTGGCGGCGG AAATCACCAT GCAACCGATC
CGCGCCTTTT CGGTTGACGC TGCGATTATT TTCGCCGATA TTCTGCCGCT GCTCGAAGGC
ATGGGGCTGC ACCTGACGTA TGAACAGGGA GAAGGTCCGG TCATCCACAA CCCGGTGCGT
TCGCCCGCCG ATGTTGCGGC ACTCCGCACT CCCGATCCGC GTGAGACGGT GGCGTACACG
ATCCAGGCGA TCCGCCTGGT GAAACGTGAC CTGGAAGGAC GTGCACCGCT GATCGGTTTC
AGCGGGGCGC CGTTCACGCT GGCAGCATAT GCGATTGAAG GCGGTTCATC GCGTGATCAC
CGGCTTACCA AGGCGCTGAT GTACGCCGAA CCGCAGGCAT GGCGCGAGTT GATGGAACGT
CTGACGGCGC AGGTGAGCGC CTATCTGATT GCACAGATCG AGGCGGGCGC GGATGCGGTG
CAGATCTTCG ATAGTTGGGC GGGGGCGCTG GCGCCCGGCG ACTATGCCGA CTATGTTTTG
CCGTTTGTGC AAAAGTGCAT CATTGCAGTG CGCGCCGGTT GCGGCATCGT TCCCCCGCCG
CCGATCATCT ATTTCGGCGT TGGACTGTCG GGCATGCTGG GGTTGCTGCG TCAGACCGAT
GCTGACGTGA TTGGTCTCGA CTGGCGCATT CACCTCGATG ATGGATGGGC GCAGGTTGGT
CCCGGCGTCG CCGTTCAGGG CAACCTCGAT CCGCATACGC TGCTGGCGCC GTGGACCGAA
GTGCGCCGCC GCACCGCCGA TATTCTCGAC CGCGCCGCCG GTCGTCCGGG GCACATTTTC
AACCTGGGTC ACGGGATTGT GCCGGAGACG CCGGTCGATA CGGTGCGTCG TCTGGCTGAG
TTCGTTCATG AGTATTCAGC GGAATAA
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| Protein sequence | MTHSRFLAAC RRQPVDATPV WFMRQAGRYM PEYRAIRERY GFLEMVKTPE LAAEITMQPI
RAFSVDAAII FADILPLLEG MGLHLTYEQG EGPVIHNPVR SPADVAALRT PDPRETVAYT
IQAIRLVKRD LEGRAPLIGF SGAPFTLAAY AIEGGSSRDH RLTKALMYAE PQAWRELMER
LTAQVSAYLI AQIEAGADAV QIFDSWAGAL APGDYADYVL PFVQKCIIAV RAGCGIVPPP
PIIYFGVGLS GMLGLLRQTD ADVIGLDWRI HLDDGWAQVG PGVAVQGNLD PHTLLAPWTE
VRRRTADILD RAAGRPGHIF NLGHGIVPET PVDTVRRLAE FVHEYSAE
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