| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1727 |
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| Symbol | |
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| ID | 5208684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2123016 |
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| End bp | 2123984 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640595333 |
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| Product | transketolase, central region |
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| Protein accession | YP_001276067 |
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| Protein GI | 148655862 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.35739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.316381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTCA TAACTGTCCG CGAAGCGCTG CGCCAGGCAT TGCACGACGC AATGCAGGAC
GAGCGCGTCT TTATCATTGG TGAGGATATC GGGCATTACG GCAGCACGTA TGGCGTCACT
GCCGGATTCC TCGAACAGTA CGGACCAGAA CGCATCCGCG ACGCTCCGAT CGCCGAATCC
GGCATTGTCG GCATCGCCAT TGGCGCAGCA ATGGTCGGCA TGCGCCCGAT CGCCGAAATT
ATGTCGGTGA ATTTTTCACT GCTGGCGTTC GATATGCTCT TCAACCACGC CGCCAAGATC
TACAGCATGT TCGGCGGCCA GATGACGGTG CCGATGGTGC TGCGCACGAC TAACGGCTGG
ACGCAACTTT CCGCCACCCA CTCGCAGTCG TTCGATGTCT ACTTTGCCCA TATGCCGGGT
CTCAAGGTCG TTGCGCCAGC GACGCCCTAC GATATGAAGG GAATGCTGAA GGCGGCGATC
GAGGACCCCG ATCCGGTGGT GTTCATCGAG CATACCTTGA TGTACACCGT CAAGGGTGAG
GTACCAGAGG AGAGTTATAC GGTTCCGCTG GGCAAAGCGC GTCTGGCGCG CGAAGGGCGC
GATATGACCG TCGTCACCTA TTCGCGCATG GTGCACCTCT CGCAGCAGGC AGCCGACATT
CTTGCCCGCG ATGGCATCGA GGTCGAAATC GTTGATCTGC GCACGTTGCG TCCGCTCGAT
ATGAGTGTGG CGATCGAAAG TTTCAAGAAA ACCAACCGCG CTGTCGTCGT AACCGAAGAC
TGGCAATCGT TCGGCACGAG CGCGGAAATT GCGGCGCGCC TGTATGAATA TGGCTTCGAT
TATCTCGACG CGCCAATTGC GCGGGTCAAC TTCCGCGAAG TGCCCATGCC TTACTCGAAG
AATCTGGAGT TGCAGACCGT GGTGACTGTC GATCGGATCG TGCATGCGAT CCGCAAGACG
CTGTCGTAG
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| Protein sequence | MPVITVREAL RQALHDAMQD ERVFIIGEDI GHYGSTYGVT AGFLEQYGPE RIRDAPIAES
GIVGIAIGAA MVGMRPIAEI MSVNFSLLAF DMLFNHAAKI YSMFGGQMTV PMVLRTTNGW
TQLSATHSQS FDVYFAHMPG LKVVAPATPY DMKGMLKAAI EDPDPVVFIE HTLMYTVKGE
VPEESYTVPL GKARLAREGR DMTVVTYSRM VHLSQQAADI LARDGIEVEI VDLRTLRPLD
MSVAIESFKK TNRAVVVTED WQSFGTSAEI AARLYEYGFD YLDAPIARVN FREVPMPYSK
NLELQTVVTV DRIVHAIRKT LS
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