Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1715 |
Symbol | |
ID | 5208672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2109790 |
End bp | 2110383 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640595321 |
Product | HNH endonuclease |
Protein accession | YP_001276055 |
Protein GI | 148655850 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.513097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATACG CGCTCGAGCG TAGGGTCATT CCCCCTTCGC CAGAGCGCAG TGAGTTGGCT TTGCAGCTTC TGGAAAGGGG GAAAGGCTTG GGGCAACGAG TTCTTGTTCT CAACGCAAGC TACGAGCCGC TACAGTTTAT TTCTGTTCGT CGCGCGATCG TTCTCTTGCT GCAGGATAAA GCAGAGCTGG TCGAAGCTGC CCAGCAGCGT CTTCGCGCGC GCGGCATCTC CCTCGAAGTT CCGCTGGTTA TCAGGCTGGT GCGATATATC CGCATCCCTC GTCGCATGCG TCTCCCCTGT TCACGGCGCA GTATCCTGCT GCGCGACCGG GAGACGTGTC AGTACTGCGG TGCGCAGCCT GGTCGCGCTC ACCTGACGGT CGACCACGTG GTGCCGCGTT CCCGTGGCGG TGAGACAACC TGGGAAAATG TGGTGACTGC CTGTCGCGAC TGCAATCACC GCAAAGGTGG GCGCACGCCG GAAGAAGCCG GCATGACCCT GCTGACCATT CCTCGCCAGC CGCAGTATGT CGCTTTTGCG CTCCTTGGTG AACTCGAACG CCACGATGTG TGGCGAAAAT ACGCATATAC ATAA
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Protein sequence | MSYALERRVI PPSPERSELA LQLLERGKGL GQRVLVLNAS YEPLQFISVR RAIVLLLQDK AELVEAAQQR LRARGISLEV PLVIRLVRYI RIPRRMRLPC SRRSILLRDR ETCQYCGAQP GRAHLTVDHV VPRSRGGETT WENVVTACRD CNHRKGGRTP EEAGMTLLTI PRQPQYVAFA LLGELERHDV WRKYAYT
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