Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1710 |
Symbol | |
ID | 5208667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2104090 |
End bp | 2105064 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640595316 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_001276050 |
Protein GI | 148655845 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGC GCCAGGTTGT CACTGCCCTG CTGATTATCC AGATCTTTGG AACAATATTG CTGGCGACCG GTCAGGTGCT GCGCGATGCC TCCAGCATTA TTCTGCCGAT GAGCATTGCC ATCGCAATCC TGCTGATCGT CTTGCTGTGG GCATACCGGC GCGGGTGGGA ACCGGCGCGC ATGATCGACA TCGTGATTGT GACGGTTGCG GTTGGCATCG CCACACCTGA CGAGTTCGTC GTGCAACGTC AGGCGCTGAT TGCGCTTGTG CCGATGGCGC TGGCGCAGGT GCTTGGCGGG CCCCGCTGGG TGGTCGGCAG CGCGCTGGGG ATGCTCGCCA TTTTCACCCT GCGCGCCGGA TCAGAGCATG GTTTCGTGAC CACCTACACC GCCGATCTGC GCACAATTGC CATCTTTATC TTCATTGTCG CCAGCATGGC GCTGAGTCGC ATCATCGCCG ATACCGCCGT GCGCAACGCG ATGAAGCAGC AACAACGGGC TGAAGAGGCG TTTGCGCGCA TCGAGACGCA GGCGCAGACC CTTCAGGAAC AAACGCAGGC GCTGCAAGCG CAGAATCAGC GCCAGCAACG GTTGCTCGAT CTCGTAGCGC AACTGGAAAC CCCGGCAATC CTGCTGGCAG AGGGAGTGCT GCTGGCGCCG GTCGTCGGAC CGATCGATGA TCAACGGGCG CAATCGTTCG TCGGGCGGTT GCTCGAAGCT GCCAGCCTCC AGCGGGCGCG CCTGGTGATT ATTGACATCG CTGGCGCCTC GAATGTGGAC AGCCGCGCGG CTGCGCTGCT GGGGCAGGCG GTGCAGGCGC TGCGCCTGAT CGGATGCCAG GTGGCAATCA GCGGCATCTC GGCAGAACTG GCGCACACCC TGGTGACTGC CGGCATCTCC TTCAATGGCG TACCCACGGT GCGCACCCCG CGCGAAGCAA TCGAACACTT CCAGATACTG ATCGAATTGT CTTGA
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Protein sequence | MTQRQVVTAL LIIQIFGTIL LATGQVLRDA SSIILPMSIA IAILLIVLLW AYRRGWEPAR MIDIVIVTVA VGIATPDEFV VQRQALIALV PMALAQVLGG PRWVVGSALG MLAIFTLRAG SEHGFVTTYT ADLRTIAIFI FIVASMALSR IIADTAVRNA MKQQQRAEEA FARIETQAQT LQEQTQALQA QNQRQQRLLD LVAQLETPAI LLAEGVLLAP VVGPIDDQRA QSFVGRLLEA ASLQRARLVI IDIAGASNVD SRAAALLGQA VQALRLIGCQ VAISGISAEL AHTLVTAGIS FNGVPTVRTP REAIEHFQIL IELS
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