| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1640 |
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| Symbol | |
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| ID | 5208595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2012122 |
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| End bp | 2014425 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640595246 |
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| Product | polymorphic outer membrane protein |
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| Protein accession | YP_001275982 |
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| Protein GI | 148655777 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCAT CCAGACGTTT TTCTCTCGTG GTGCTGCTCC TTGTGATGAC CCTCGCCACC
GGCTGGTTCC TCGCCATACC CGTCAGCCGC GCTGCAACGT TCACCATTCC GTGCAGCGAC
GTTTCGGCGC TCATCACAGC CATTAACACC GCTAACAGCA ATAATCAGCC CGACACCATC
GAACTTGCCG CCGGATGCAC CTACTCGCTG GCGACGGTTG ACAATACGTT TGGTGGATCA
GCAAACGGAT TGCCGGTCAT TATTGTTGAT AGCTCTTCGA CAAACAGCCT GACAATCAAC
GGGAATGGCG CAACGATTGA GCGCGTGGCT GGAAGCCCGC CGTTTCGATT CCTGTATCTT
CGCGATCAAA CCTTCGTAAA CACCGTTGTG GTGACGATCA ATGACCTGAC CTTCCGCAAC
GGCGATACAG ACAACGACGA GGGGGGCGCA ATTCTGGCGC GCAACGCCCG ACTGACCCTC
AACCGCGTCG CCTTCGAGAA CAACCAGGCG ACGTTTGACG GCGGCGCCGT CGTTGCGCGC
AACTCTGAAC TGACGCTCAA CCGCGCCCTG TTCGAGAACA ACCGCGCATT GACTGCTGGC
AGCGCCGAAG GTGGAGCACT CTACACGGTT AATGCAACCA CGACCATTAC CGACAGCATC
TTTCGCAACA ACCGGTCGGA GCGGAGCGGT GGCGCTATCA CGTTCCGTAC TGATGGCTTC
GTCGATCCCG CAACGGTGAC CGGCACAACC TTCAGCGGCA ACCAGACGAC GGGCGAAGGC
GGGGCAATCG CGGCATACCA CGACGTTACT GTCAGCAACA GCACCTTCAG CGGCAATCAG
GCTGGTGACA ACGGCGGCGC GCTGTTTTCT GATATGGGAG CTCAACTTGA ACATGTGACG
ATGACCGGGA CGCAAACCGG CGGCAACGGC GCGCTGTACG GCACTGCCAC GCTGCGCGGT
TCTCTGATCG CCGGCAATGC CGACACGTCG CCGGGCGGGG GCGAGAACTA TCCCGACATC
GCTGGCTCTC TTTCCAGCAA CGGATACAAT CTCATCGGGA ATGTCGGCAA CTATGATTTC
GCCGCGAACA CCACTGGCGA TCAGTACGGC GATCCTGTCG GAACCACTAC ACCGAACACC
GGCGCAATTG AGTCGTCAAC ACCGATCAAT CCGTTGCTTG CGCCGCTCGC CAGCAATGGC
GGTCCGACGC CAACCCACGC GCTGACGGGA GGTTCGCCAG CTCTGGATCA GATTCCGGCG
AGTGCATGCA GCGTGACGAC CGATCAGCGC GGCGTTTCTC GACCACAGGG CAGCGCCTGC
GATATTGGCG CATTTGAGGC GGTACCTGCG CCTGAAATCG CGGTGTACGA CGGTCCTGAC
GCCAGCAGCC CGGAACTGAC GAACAATCAG GCGACGGCGG TCTCCTTCGG AACGACCACC
GTCGGCGCAC CGGTCGCGCG CGTCTTCACC ATCCGCAACG CCGGTACCGC GCCGCTGACC
CTCGGCGCAC TGACCCTTCC TGCCGGTTTT GTGGTCGTCG GCGCTTTTCC CGGAGGACCA
GTCGCTCCCG GCGCGACGGT CACGTTTACG GTGCAACTGA CGGCTGCGAC TGCCGGAACC
TTCAGCGGTA CGCTCTCCTT CGTCAACGGC GACGCCGATG AGAGTCCGTT CCGGTTTCCG
ATCAGCGGCG TTGTTACGGC TGCGACTCCG TCGCTTCAGC AGGCATATCT GCCGTTGATC
ATGCGACCAG GGCAGCCTGA CCTGATCATC GCCAGCATCG AGATCATTCC CAACCAGACA
ACGTTCGCTG CCGGGCAACT GGTCGAGATT CGGGTGACGG TGAAGAATGT CGGCACTGCG
CCTGCCGGAC CGTTCTGGGT CGATCTGTAC CTCAACCCGG ATCGTCCGCC ACGGGTGAAT
GATCTCTGGC ACGACCGCTG CGCACTGCAA CCCTGTTTCG GCGTTGCATG GGGGGTCACG
CAGGCATTGC AACCGGGTGA GCAGATCACC CTCAGCACGA GCGGCGGCTA TGATGCGCTC
CGCACATACT GGCTCGGCTG GCTGGCAAAT GACACAACGA CGATCTATGC CCTGGCGGAT
AGCTGGAACA CGGTCGGCGT GAGCGGCGCG GTATTCGAGT CTGACGAAAC GAACAATCGC
GGCATACGCG ACGGTCTGAT CGTCAGCGGA ACCAATCCGC CAGCGCCGCC ATGGACGCCA
TCGTATCTTG CCGGACCAGC GCACTCGTCG CTCCTGCCGG ATCGACCGGC GTATGCACGA
CCGGGCGGGA AGATTGAACG TTGA
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| Protein sequence | MRPSRRFSLV VLLLVMTLAT GWFLAIPVSR AATFTIPCSD VSALITAINT ANSNNQPDTI
ELAAGCTYSL ATVDNTFGGS ANGLPVIIVD SSSTNSLTIN GNGATIERVA GSPPFRFLYL
RDQTFVNTVV VTINDLTFRN GDTDNDEGGA ILARNARLTL NRVAFENNQA TFDGGAVVAR
NSELTLNRAL FENNRALTAG SAEGGALYTV NATTTITDSI FRNNRSERSG GAITFRTDGF
VDPATVTGTT FSGNQTTGEG GAIAAYHDVT VSNSTFSGNQ AGDNGGALFS DMGAQLEHVT
MTGTQTGGNG ALYGTATLRG SLIAGNADTS PGGGENYPDI AGSLSSNGYN LIGNVGNYDF
AANTTGDQYG DPVGTTTPNT GAIESSTPIN PLLAPLASNG GPTPTHALTG GSPALDQIPA
SACSVTTDQR GVSRPQGSAC DIGAFEAVPA PEIAVYDGPD ASSPELTNNQ ATAVSFGTTT
VGAPVARVFT IRNAGTAPLT LGALTLPAGF VVVGAFPGGP VAPGATVTFT VQLTAATAGT
FSGTLSFVNG DADESPFRFP ISGVVTAATP SLQQAYLPLI MRPGQPDLII ASIEIIPNQT
TFAAGQLVEI RVTVKNVGTA PAGPFWVDLY LNPDRPPRVN DLWHDRCALQ PCFGVAWGVT
QALQPGEQIT LSTSGGYDAL RTYWLGWLAN DTTTIYALAD SWNTVGVSGA VFESDETNNR
GIRDGLIVSG TNPPAPPWTP SYLAGPAHSS LLPDRPAYAR PGGKIER
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