| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1628 |
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| Symbol | |
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| ID | 5208583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1998835 |
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| End bp | 2001003 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640595234 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_001275970 |
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| Protein GI | 148655765 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.413609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTCA ATGAAGCAGT CAAACTGCGC AACAATCGTC TGGCGCAGTA CTATGGCATG
TTCACCGTTG GTCTGATCGT TTTCGCCCTG ATCATGGGTG CGCTGGAACT CGGCGCAGGC
ATGCCTAAAG CCTGGATCGG GTGGACGTTC CTGATGTTGA CGATGGGGAT GTACGCCTTT
ATCGGCATCA TGAGCCGCAC CAAGATCCTC GATGAGTACT ACGTTGCCGG ACGGAATGTA
CCAGCAGTCT TCAACGGCAT GGCGACCGGC GCCGACTGGA TGAGCGCAGC GTCGTTCATC
TCGATGGCCG GTACGCTCTA TGCGCTGGGG TATGACGGGC TGGCGTACAT TATGGGATGG
ACGGGCGGCT ATGTGCTGCT GGCGCTCCTG TTCGCACCCT ACATTCGCAA GTTCGGTCAG
TACACCATTC CCGACTTCGT CGGTACGCGC TATGGCGGGC GCTGGCCCCG CCTGGTGGCG
GCGATCTGCG CCATCATCGT CAGCCTGACG TATGTAACGG CGCAGGTGGT CGGCGTTGGC
ATTATTATGT CGCGCTTCAT CGGCGTGCCG TATGAATGGG GCGTGGTGAT CGGTCTCTCC
GGCGTGCTGG TCTGTTCGTT CCTGGGTGGC ATGAAGGCGG TGACCTGGAC CCAGGTGGCA
CAGTATATCA TCCTGATCAT CGCCTATATG ATCCCGGTGA CCTTCCTTTC GCTCAAACTG
ACCGGCTTCC CGATCCCGCA GTTGAGCTAC GGTCAGGCGC TGCAGAATAT CACCCGCCTG
GAGAGTGAGC TCAAGATCGC TACGGAGTCG AAGGCGCGCG ATGGTACCGG GCGCGTTATT
CAGGGCGGAT ATGTGCCCGC ATACAACGAG GGCCTGAGCA ACGCAGCCGC TGTGACGGCG
ATCAATCAGA TCAATACCTA CTTCGGCGTC AACATTACGC CGCCGAAGGC GCAGTCGATC
CCCGATACCA GCAAACCGGC CGAGGAAATC CAGCCCGACT GGCGCGGGAC GCCGTGGAAC
TTCCTGGCGC TCACCTTCTG TCTGATGGTG GGCACTGCCG GTCTGCCGCA CATCCTCATC
CGTTTCTACA CGGTGCCAAG TGTGCGTGAA AGCCGCCTGA GCGTCGGTTG GGCGCTGTTC
TTCATCTTCC TGCTCTACTT CACAGCGCCT GCATATGCTG CATTCGCGCG CTGGGAAATC
CTGCAAAACG TGGTCGGCAA GGAGATCAGT TCATTGCCGG AGTGGACGCA GAACTGGAGC
CGCCTGGGTC TGATCACGCA GCGCGACTAC ATGACCCTCA ACGGGCGCGA CATTGATAAG
CTGCCAGCCT GGGCTGCACC GCAGGTGAAG AGCGGCGCGC TGGTGATCAC CGACGCCAAC
GGCAACGGCA AGATCGACCT GGCTGGCGCA ACCTTTAGCG AGACCGAAGT CGATGGCAAG
AAGATCGGCA CCTTCGGCGA ACTGTCGGGC ACGGCGATCA CCAAGACCAG CGTTGACGGC
ATCCTGCAGT TCAGCGAACT GAACATCGAT CCGGATACAA TCGTGCTGGC GACGCCGGAA
ATTGCTGGCC TGCCGTACAC GGTCGCCGCG CTGATCGCTG CTGGAGGTAT GGCGGCGGCG
CTCTCCACCG CCGACGGTCT GCTGGTGGTC ATTTCGTCCG CCATTGCGCA CGACTTCTAC
TACCGCATCA TCAATCCGAA AGCCAGCATG AACACCCGCA TCTGGCTCGG CAAGACGATG
CTCGTGGTGG CAGCCGTGAT TGCGGCACTG CTCGCGCTGC CACGCCTGGC GCTGATCGCG
CAGATGGTGG CGTGGGCGTT CTCGATGGCG GCATCGTCGT TCTTCCCGGT GGTGCTGCTT
GGCATCTTCT GGAAACGCTG CAACGGTCCT GGCGCGATCG CCGGTATGGT CGGCGGTCTG
TCGGTAACGC TCTTCTACAT GTACAGCAAC TATGTCGATC CGTCGTTCAA CGTCCTGGGC
ATCACGCACC TGGCGGCTGG CATCTTTGGT ATGCCGGTCA ACTTCCTGCT CTGCTATATC
GTGAGTAAAC TGACGGCGGC GCCGTCGCAG GAGATCCAGG ACCTGGTCGA TCACCTGCGC
AGCCCGGAAC TCGATGATGA ATTGATGACC AGCATCGCCA GCGGGAAGCA GGCGGCCGGC
GCACGCTAG
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| Protein sequence | MAVNEAVKLR NNRLAQYYGM FTVGLIVFAL IMGALELGAG MPKAWIGWTF LMLTMGMYAF
IGIMSRTKIL DEYYVAGRNV PAVFNGMATG ADWMSAASFI SMAGTLYALG YDGLAYIMGW
TGGYVLLALL FAPYIRKFGQ YTIPDFVGTR YGGRWPRLVA AICAIIVSLT YVTAQVVGVG
IIMSRFIGVP YEWGVVIGLS GVLVCSFLGG MKAVTWTQVA QYIILIIAYM IPVTFLSLKL
TGFPIPQLSY GQALQNITRL ESELKIATES KARDGTGRVI QGGYVPAYNE GLSNAAAVTA
INQINTYFGV NITPPKAQSI PDTSKPAEEI QPDWRGTPWN FLALTFCLMV GTAGLPHILI
RFYTVPSVRE SRLSVGWALF FIFLLYFTAP AYAAFARWEI LQNVVGKEIS SLPEWTQNWS
RLGLITQRDY MTLNGRDIDK LPAWAAPQVK SGALVITDAN GNGKIDLAGA TFSETEVDGK
KIGTFGELSG TAITKTSVDG ILQFSELNID PDTIVLATPE IAGLPYTVAA LIAAGGMAAA
LSTADGLLVV ISSAIAHDFY YRIINPKASM NTRIWLGKTM LVVAAVIAAL LALPRLALIA
QMVAWAFSMA ASSFFPVVLL GIFWKRCNGP GAIAGMVGGL SVTLFYMYSN YVDPSFNVLG
ITHLAAGIFG MPVNFLLCYI VSKLTAAPSQ EIQDLVDHLR SPELDDELMT SIASGKQAAG
AR
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