| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1617 |
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| Symbol | |
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| ID | 5208572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1981527 |
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| End bp | 1982939 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640595223 |
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| Product | UDP-glucose/GDP-mannose dehydrogenase |
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| Protein accession | YP_001275959 |
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| Protein GI | 148655754 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00988833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.440114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA TTGTTGTCGG CACCGGATTC GTGGGCCTGA CTCATGCAGC GGTATGCTCG
GAGTATGGTC ACGAAGTGTA CGCATATGAT ATTGATCACC AGCGTATCGA GGCATATCGG
TCATGCCGCC CAGAGGCGAT CGAGCACTAC GTGCACGAAC CAGGACTGAC GAGCATTATT
CTCGAAAATC ATGGGCGGTA TCTGTTCTTC GTCGATGATG TCGAGTCGGT CATCGAGGGC
GCCGATGCGC TCTTCTTATG CCTGCCCACG CCACCCAAAC CGGACGGCTC GTCGGACCTG
AGTTACTACT TCGCGGCAGC GCGCTATCTG GCGGAACTGC TGGCGCGGCG GCGTGATCAG
CGTCGCGTGG TGGTGATCAA CAAGAGCACG GTGCCGATCG GCACGGCGCG TCAACTTGAG
CGCGTGTTGC GCGAGTATAA CGTTCCCAAC GCGGGGGTCG CTTCGAACCC GGAGTTTCTT
CCTGAAGGCG ACGCGGTCGA GAAATCGCGC CGTCCGGATC GCGTCGTGGT CGGCGCCGAC
AATGAGGAGG ATTTCCGCAT CATTCGCCGG ATCTACTCGC AGTTCGTCAA CCACGTGCGC
ATCCGGTATA TCGAAACCAC GCCGGAAACG GCGGAAGCGA TCAAGTACGT CGCAAATACG
CTTTTGCTGA CCTACATCTC CTTCTGGAAC GGGGTTGGGG CGCGTCTTGC CGAAACATTC
CCTAACATTA TCATGGAGGA TTTGAAGCGC GGCGTGACTG CCGATGCGCG CATCAGCACG
TGGGGATCGT ATGTCTCGAA CGGCGCTGGC GGATCCTGTT TCGGCAAGGA TATTCAGTCG
CTCATCTACC AGCTGAAAAC CGCCGGTCAG TCGGTCGATA TTTTGCAGTC GGTCTACGGC
ATCAACGAAT ACCAGAAGAC CTACCTGATC GACCGTGCGA TCCGTGAGGC GGGGGTCAGT
TTCAACAACA AGACCGTGGC GCTCCTGGGG CTTGCGTTCA AGCAGCGCAC CAATGACATG
CGCGACTCAT CGGCGCTCAA GGTGGTCGAA GCGCTGCTGG GCAGGGGGGT GCGCTCCATC
CGCGCCTATG ATCCGATGGC GTTGCGTGAA GCACGCAAGT TTTTCGACCC GGAAAAGAAC
CATCTGTTCG AGCGCATTTC GTACCATACC TCGGTGCGCG AGGCGCTCGC TGGCACCGAC
ATGCTCTTTA TCTCCACCGA CTGGGAAGAG TTTCGCGGTC TGTCGCGCAC CATCGAGGAG
ACGGTATCTC CTCCCTACCT GGTGATCGAT GGGCGGCGGA TGATCCCTGA CTATACGGAA
CTGGTTGCCG CCGGCTATGG GTATCTCGCC GTCGGATCGC CCTATATGCC GCCTGGCGAT
ACGCTGCCAG GTCGTGGCAG GAGTCGTCTC TGA
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| Protein sequence | MKIIVVGTGF VGLTHAAVCS EYGHEVYAYD IDHQRIEAYR SCRPEAIEHY VHEPGLTSII
LENHGRYLFF VDDVESVIEG ADALFLCLPT PPKPDGSSDL SYYFAAARYL AELLARRRDQ
RRVVVINKST VPIGTARQLE RVLREYNVPN AGVASNPEFL PEGDAVEKSR RPDRVVVGAD
NEEDFRIIRR IYSQFVNHVR IRYIETTPET AEAIKYVANT LLLTYISFWN GVGARLAETF
PNIIMEDLKR GVTADARIST WGSYVSNGAG GSCFGKDIQS LIYQLKTAGQ SVDILQSVYG
INEYQKTYLI DRAIREAGVS FNNKTVALLG LAFKQRTNDM RDSSALKVVE ALLGRGVRSI
RAYDPMALRE ARKFFDPEKN HLFERISYHT SVREALAGTD MLFISTDWEE FRGLSRTIEE
TVSPPYLVID GRRMIPDYTE LVAAGYGYLA VGSPYMPPGD TLPGRGRSRL
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