Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1615 |
Symbol | |
ID | 5208570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1977704 |
End bp | 1980004 |
Gene Length | 2301 bp |
Protein Length | 766 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640595221 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001275957 |
Protein GI | 148655752 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2203] FOG: GAF domain [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0544593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.317944 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTTA CGCAGCCGTC GCTTGTGGGT GAAATCTACG ATCAACCAGT CAACGAAGCG GAACAGCGGA GCGAGGTTCT GAGCAACCTG CTCGATGTTT CGACCTACCT GGTTTCCGTT CTCGACCCGA CCGAACTGTT TGCGGGATTG GTGCGGCGCG TCGTCGAAGT GGTGCCCGCT GTCCAGGCCG GGTTGCTCTG GATCTACGAC CGACAGCAGA TGGCGCTGCG GCTGGAGTCG TACTACGGGC TTGATCTCGG TCCTGCCACC GAAGCGATCT GCCGTCTGCG ATTGCGCCCG GGCGAAGGGC TGGCAGGTGA AGCGTTGCGG CGCGGCGAGC CGCTCCTCAT CGAAACGCGC TCATCATACC GTGATCTGGC GCGACGGGTC AGCCCGCGCA GTGAACCGGA CATATGCGCC TTCCTCGAAC GTCTGCCGCG CGAGTTGACG GCTGTGATTC TGCCGCTGCG CATCGGTGCG GAAGTGATTG GCGTGCTGGA ATTGATGAAT CTCGGCAACC GTCCACAACT GCGCCGCACC GATCTGCAAG TGCTGCAAAC GTTCAGCAAC CTGGCAGCCG GCGCAATTAA GAATGCGCAA CTCCACGCCC AAATGCAGGC GCACCAGCGA CGACTGGAAG CGTTCGGCGC GATTGGCACG GTGATCAGCA CGGCGGCGGA TCTTGACGAA CTCATGCGCA ATGTGCTTGA TGTCGTGCTT GGCGTTGTGG AAGCGTCGGT TGGCGTACTG TTCCTCCTCG ATCCCGGTCG TGGCGTGTTG CAACCCGGCG CCTGGCGTCA CGTTCCGCCG CAGTTCGTCG AACAGAACCG TGAAATCCAG GTCGCTGGCG CAGCGTGCGA AGAGGCGGTG CGCTACGGTC AACCGATCCG TCGTCCGCTC ATCGTCGGGA CCGGCGAAGA ACTGTTGCTG GAAGCCGGTC TTGCGGGATG CGCCTATGTG CCGCTGCTGG CAGGCGGCAC GGTGGTGGGA GTGATCGGGA TCTATGGCGA CGCCTCCCTG CCAGAACGCA TCGATGTGCA GACAGTGATG ATGATGAGCA ACCTGATCGG GTTCGCCATC GCCAACGTGC GTCTGTATCA GGAAAGCCAC ATCGAGCGCC GGAAACTGAC TGCGGTGATC AACAGCATTG TCGAAGGGGT GGTGTTGTGT GATCGCCTCG GTCGCCTGGT GCTCGCCAAT CGTACTGCAA TGGAACTGCT CTCGTCCGAC TCGTTCACGT CATTCCCCTA CCAGCAACCG ATCAGTTCGA TGGTGGATTT CTATGCCATC CGCGATCTGG AGGGACGCAT GCTGCCGGTT GAACGTCTGC CGCTGGCGCG TGCGCTTGCC GGAGAGGTAT TTCACGATTA CCGGGTGTTG CTGCGCGGCG CCAGTGGCGA AGATACGGTG ATGAGTTTCA GCGGCGCCCC CGTGTATGGC GATATGAACA CCATCGAAGG CGCGGTTGTC ATCTTTCGGG ATATTACCGA GCACCAGAAA CTGGAGCGCG CAAAAGACGA CTTCCTGGCA GTCGCAGCTC ACGAACTGCG CAGTCCGCTG GCTGCGGTGC GCAGTTACGC CGATCTGCTC ATCCGACGCG AGCAGCGGCG TGATAAGGAA GATACGACCG AGTTGCGCGG TCTGACCATC CTTTCGCAAC AGGTCAGCCA TATGCTGCGC CTGGTTGATA ACCTGCTCGA TATGTCGCGC CTGGATGCGG GTCTCTTCAG TCTGCAACTT CAGCAGGTCA ACCTGGTGGC ATTGACGCAC CAGGTGATCG AGCAGTTGCG CCCGGTCATC GGCGAACGCG ACGTGACCCT GACCTGCGAC GCTCCCGATC TGCTGGTCAT CTGTGATCCG CTGCGTATCC GTCAGGTGCT GACGAATCTG CTGGTCAATG CGGTGCGATA CAGCGGGCCC GGCTCTCCCG TCGAAATTGC GGAAGTCGTT ATTCGATCAG ACGTGCTGGC GGCAAGGTAT GCCCATCAAC CGCCAGCAAC GTTGCGCGCC CTGGTCGGTG AGATGCAACG TCATCCCAGA CCGCTGGCGT TGATCACGGT GCGCGATCAT GGCATTGGCA TGTCGGAAGA GACGATGCAA CGCCTGTTTC AGCGGTATGC GCGTGGTCGT CATCGCAGCG GCGAAGGTCT TGGGCTGGGG TTGTATCTCA GTTACGAAAT GACCGTGCGT CATGGCGGCA CAATCTGGGC GGAAAGCATC GAAGGACGCG GCAGCACCTT TTATGTCGCA CTTCCGATAG GGGGTCCGCA TCAGGACAAA AGTCCTGATG CAGCAACGTA A
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Protein sequence | MTVTQPSLVG EIYDQPVNEA EQRSEVLSNL LDVSTYLVSV LDPTELFAGL VRRVVEVVPA VQAGLLWIYD RQQMALRLES YYGLDLGPAT EAICRLRLRP GEGLAGEALR RGEPLLIETR SSYRDLARRV SPRSEPDICA FLERLPRELT AVILPLRIGA EVIGVLELMN LGNRPQLRRT DLQVLQTFSN LAAGAIKNAQ LHAQMQAHQR RLEAFGAIGT VISTAADLDE LMRNVLDVVL GVVEASVGVL FLLDPGRGVL QPGAWRHVPP QFVEQNREIQ VAGAACEEAV RYGQPIRRPL IVGTGEELLL EAGLAGCAYV PLLAGGTVVG VIGIYGDASL PERIDVQTVM MMSNLIGFAI ANVRLYQESH IERRKLTAVI NSIVEGVVLC DRLGRLVLAN RTAMELLSSD SFTSFPYQQP ISSMVDFYAI RDLEGRMLPV ERLPLARALA GEVFHDYRVL LRGASGEDTV MSFSGAPVYG DMNTIEGAVV IFRDITEHQK LERAKDDFLA VAAHELRSPL AAVRSYADLL IRREQRRDKE DTTELRGLTI LSQQVSHMLR LVDNLLDMSR LDAGLFSLQL QQVNLVALTH QVIEQLRPVI GERDVTLTCD APDLLVICDP LRIRQVLTNL LVNAVRYSGP GSPVEIAEVV IRSDVLAARY AHQPPATLRA LVGEMQRHPR PLALITVRDH GIGMSEETMQ RLFQRYARGR HRSGEGLGLG LYLSYEMTVR HGGTIWAESI EGRGSTFYVA LPIGGPHQDK SPDAAT
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