| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1596 |
|---|
| Symbol | |
|---|
| ID | 5208551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1948201 |
|---|
| End bp | 1948977 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640595202 |
|---|
| Product | RDD domain-containing protein |
|---|
| Protein accession | YP_001275938 |
|---|
| Protein GI | 148655733 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1714] Predicted membrane protein/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAT CAATGCAGAT TAATGACTAC ATCGTTGAGA CCCCAGAACA GATCGAACTG
GCATACGATA TTGCCGGGAT CGGCTCGCGG TTTCTGGCGG CGATCATCGA CAGCGCGCTG
ATCATCCTGG CAGAAGTGGC ATTGTTTCTT GCAGTCGCTC AGGTCGCTGG CATGCTCCAA
TTTGCGGAGA GTGTGTGGCT TGCCATCGGA GCAACACTGG GGTTCGTCAT CCTCTGGGGA
TACTATATCG CGTTCGAGTT GACATGGAAC GGGCAAAGTC CCGGTAAGCG CCTGATCGGG
CTGCGGGTTG TAACCGAAGG GGGGCGCCCG ATGACCGTCC TTGGGTCGGT CATTCGGAAT
CTGATCCGCA TTATCGACTT CCTGCCGTTG TTTTACGGCA TTGGCGTGAT TGCGATGTTT
ATCGACGGGC GCGCACGGCG GTTGGGCGAT CTGGCAGCCG GTACGCTGGT GGTGCGTGAA
CGCGCCGACG TGACGCTGGA AAGTCTCGTT GCCAACGTAG CGCCGGAGAC GCCGCTTCCG
CCAGATGATA ATGATCTTGC CATCGATGCA GGTCTGTTGA CGCCCGACGA TTATGCGCTG
TTGTGCGACT TTCTCGATCA GCGCCGCGAT CTGGCGCCAC CCGTGCGTCG GCAACTGGCG
ATGCAGTTGG GCGAAGGGTT GCAGGTGCGA CTCGGTCTTC CGCCTGACGA TCCGGAACGG
TTGATCGAGC GCGTCGTCCA TGCCTGCCGG CTGCGGCGCC TCGAAGAACG GCAGTAA
|
|---|
| Protein sequence | MSASMQINDY IVETPEQIEL AYDIAGIGSR FLAAIIDSAL IILAEVALFL AVAQVAGMLQ
FAESVWLAIG ATLGFVILWG YYIAFELTWN GQSPGKRLIG LRVVTEGGRP MTVLGSVIRN
LIRIIDFLPL FYGIGVIAMF IDGRARRLGD LAAGTLVVRE RADVTLESLV ANVAPETPLP
PDDNDLAIDA GLLTPDDYAL LCDFLDQRRD LAPPVRRQLA MQLGEGLQVR LGLPPDDPER
LIERVVHACR LRRLEERQ
|
|---|
| |