Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1540 |
Symbol | |
ID | 5208495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1881334 |
End bp | 1882062 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640595147 |
Product | ABC transporter related |
Protein accession | YP_001275883 |
Protein GI | 148655678 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.8751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGAG GTGTTGGCAT CACCAAACGT TTCGGCGGCG TTACGGCGCT GCGGAACGTC AGTTTCGAGG TCGGCGCCGG CGAACTGGTT GGACTGATCG GTCCAAACGG ATCGGGCAAG AGCACCCTGT TCAGCGTGAT CTCCGGGTTC CATCCGCCGG ACGAAGGCGC CGTTTTCTTT GATGGGCGCG ACATTACCGG CGCCAGACCG CACACTGTCG CACAGATGGG GATCGCACGA ACGTTTCAGA TCGTTCGCCC CTTCACCGGT ATGACCGTCG TCGAGAATGT GCGGGTCGGT GCGCTCTACG GACGCGGTGA GCGCAGCATC GCCGTCGCCG ACCGCCGCGC CAGGGAGCTG GTCGAATTCG TCGGGCTGGA ACAGCGCGCC GATACGCTGG CGCGCAACCT GACGCTGGCG GAAAAAAAGC GCCTGGAGAT CGCACGCGCG CTCTCGATCC AACCGCGTGT GCTCCTGCTC GACGAGGTGT TTGCCGGACT CAATCCAACC GAAGTGCGCG GCGCTATCGA CCTGATCGCC CGCATTCGCA GCCAGTTCGG CGTGACCATC ATCATGGTCG AACACGTCCT CAAGGCGCTG ATGGAAACCT GTGAACGCAT CATCGTGCTG AGCTACGGCG AAAAAATTGC CGAGGGCGCA CCATCCGCCA TTGCTGCCGA CCCACACGTG ATCAGCGTCT ATCTGGGAAA GACGTATGCT GCACGTTGA
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Protein sequence | MLRGVGITKR FGGVTALRNV SFEVGAGELV GLIGPNGSGK STLFSVISGF HPPDEGAVFF DGRDITGARP HTVAQMGIAR TFQIVRPFTG MTVVENVRVG ALYGRGERSI AVADRRAREL VEFVGLEQRA DTLARNLTLA EKKRLEIARA LSIQPRVLLL DEVFAGLNPT EVRGAIDLIA RIRSQFGVTI IMVEHVLKAL METCERIIVL SYGEKIAEGA PSAIAADPHV ISVYLGKTYA AR
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