Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1509 |
Symbol | |
ID | 5208464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1834733 |
End bp | 1835713 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640595117 |
Product | UDP-glucose 4-epimerase |
Protein accession | YP_001275853 |
Protein GI | 148655648 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1087] UDP-glucose 4-epimerase |
TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0386563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0493544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAATCC TTGTTACCGG CGGCGCCGGT TATATTGGAA GCATCTGCGC CGCAGAACTC CTCGCAGCCG GTCACGATGT CGTCGTGTTC GACAATCTCT ACCAGGGTCA TCGTGCAGCC GTGCCATCCG GAGCGGCCTT TGTTGAAGGC GACCTGCGCG ATCCCGACGC GGTGGCGCGC CTGTTTCGCG ATCACCGCGG GTTCGACGGC ATCATGCACT TTGCGTCGTT TACGCTGGTG GGAGAAAGCA TGCAACTCCC GCTCAAATAT CTGCGCGACA ATCTGGTCGC AGCAGCGAAC CTGCTGGAAC AGGCGGTTGC GCATGGCGTG GGGCGCTTCA TTCTCTCCTC CACTGCCAAT CTGTTCGATG ATCCGGCAAC CATCCCGATC GATGCCGATG AACGGATTGT GCCGGGTTCG CCGTATGGCG AGTCGAAGTA TTTCATCGAA CGGACGCTTT ACTGGTTCGA GCGGATCTAC GGGTTGAAGT ACGCCTGTCT GCGCTATTTC AACGCCGCCG GCGGCATGCC CGACCGCGGG GAGCATCATG AGCCGGAACT GCACCTGATC CCGATTGTGC TCCAGGTGGC GCTTGGTCAG CGCGAGAAGG TGATCATTTT CGGCAATGAT TACCCGACGA AGGACGGTAC GTGCGTGCGC GACTATATCC ACGTGCTCGA TCTGGCGCAG GCGCACATTC TGGCGCTCGA AGCCCTTGAT CGCCTGGGCA GTCGCACGTA TAACCTGGGC AACGGCAACG GTTTCACCAA TCTGGAGGTC GTCGAGACGG CGCGAAAGGT GACCGGTCAC CCCATCCCGT ATGAGTTCGG TCCGCGGCGT CCCGGCGATC CGGCGATCCT GATCGCTTCG TCGGAGAAGA TCCGCAACGA ACTCGGCTGG TCGCCGCGCT TCCCGCACCT GGAACAGATC ATCGGCAGCG CCTGGGAATG GCACCGTCGC CATCCGCATG GGTATCGCTG A
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Protein sequence | MKILVTGGAG YIGSICAAEL LAAGHDVVVF DNLYQGHRAA VPSGAAFVEG DLRDPDAVAR LFRDHRGFDG IMHFASFTLV GESMQLPLKY LRDNLVAAAN LLEQAVAHGV GRFILSSTAN LFDDPATIPI DADERIVPGS PYGESKYFIE RTLYWFERIY GLKYACLRYF NAAGGMPDRG EHHEPELHLI PIVLQVALGQ REKVIIFGND YPTKDGTCVR DYIHVLDLAQ AHILALEALD RLGSRTYNLG NGNGFTNLEV VETARKVTGH PIPYEFGPRR PGDPAILIAS SEKIRNELGW SPRFPHLEQI IGSAWEWHRR HPHGYR
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