Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1452 |
Symbol | trpD |
ID | 5208406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1764943 |
End bp | 1765968 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640595061 |
Product | anthranilate phosphoribosyltransferase |
Protein accession | YP_001275798 |
Protein GI | 148655593 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.432997 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAATCC GTGATCAGAT CATTCAGATC GTTCGGGGCC ACGATCTCAG CGAAGACCAG GCTGCCGAAG CGATGGAAGA AATCATGACC GGCATGGCGA CGCCAGCGCA GGTTGCGGCG CTGCTCACGG CGCTCCACCT GAAGGGCGAA ACCGACGCCG AAATTGCCGG TATGGCGCGC GTGATGCGGG CTAAAGCTAT TCCAGTTCAC TTCGACGCGC CGCTGCTCGA CACATGCGGC ACCGGCGGCG ACGGCGCCGG AACATTCAAC ATCTCGACGA CCGCCGCCTT CATCGCCGCC GGCGCAGGCG CGATTGTCGC CAAACACGGC AACCGCGCTA TGTCGAGTGT CTGCGGTTCC GCCGACGTTC TCGAAGGGCT GGGGGTCAAC ATCGAACTGG ACGCCGCCAG TGTGGCGCGC TGTCTGGATC AGGCGGGCAT CGGCTTTATG TTCGCACAAA AGTTTCACCC TGCGATGCGC TTCGTTGGTC CGGTGCGCCG CGAGATCGGC ATCCGCACTG TATTCAACAT TCTCGGACCG CTGAGCAATC CGGCGCATGC GCGCCACCAG GTGCTCGGCG TCGCCGACCC GGCGCTGGCG GAAAAGATGG CACGGGCACT GCACCTGCTC GGCACACAGC ACGCGCTGGT CATCCACGGG CATGGTGGTC TCGACGAACT GACGCTCAGC GGACCGAACC TGGTGATCGA CGTGCGCGCC GGTCACACGC CGCGACGCTA CGAAGTCACT GCCGCCGATC TGGGGCTTGC TCCCGCCCCG CGCGAAGCGC TGCGCGGCGG TGATGTGTCC GTCAATGTCG CCATCGTGCG CGGCATTCTT TCCGGCGAGG ATCAGAGCGC GCGACGTGAT GTCGCGCTGT TGAACGCCGC CGCCGCCCTG GTTGCCGCCG ACCGCGCCGC CGACCTGCGC GACGGACTGC ACCAGGCGCG CCACAGCCTG GAGAGCGGCG CAGCTCTGGC ACGCCTGGAG CGGCTGATCA CGGTCAGCCG GGGGGGTGAA GGTTGA
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Protein sequence | MPIRDQIIQI VRGHDLSEDQ AAEAMEEIMT GMATPAQVAA LLTALHLKGE TDAEIAGMAR VMRAKAIPVH FDAPLLDTCG TGGDGAGTFN ISTTAAFIAA GAGAIVAKHG NRAMSSVCGS ADVLEGLGVN IELDAASVAR CLDQAGIGFM FAQKFHPAMR FVGPVRREIG IRTVFNILGP LSNPAHARHQ VLGVADPALA EKMARALHLL GTQHALVIHG HGGLDELTLS GPNLVIDVRA GHTPRRYEVT AADLGLAPAP REALRGGDVS VNVAIVRGIL SGEDQSARRD VALLNAAAAL VAADRAADLR DGLHQARHSL ESGAALARLE RLITVSRGGE G
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