Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1405 |
Symbol | |
ID | 5208357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1713276 |
End bp | 1713878 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640595016 |
Product | RDD domain-containing protein |
Protein accession | YP_001275755 |
Protein GI | 148655550 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000118543 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000767347 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAGTA TCTCGATCGC TCCGACCTAT TCGGGAGTGA ACCTGGCAGA ACGACCCTCG CGGCGCAGAA GAGCGGGCGC ACTTCTTATT GACGCATGTA TCCATAATGC CGCGTTTCTT GTATCGTTCG TCGTCGTTTA CTTGCCCCTC GCTATAGTCT ACTACCTCAT AACCGGTCGA GATCCCGAAT TTATTAGTGA AAGCGTCGCT GGCAACCTTC TCGATTACGC GGTTTCGCTG TTTTCAGCGT TCACCTATTT CATTGCATTC GAGACAATCT ACGGCGCTAC GCCCGGCAAA TGGCTGCTTG GCATGCACGT GTTCAAGTCA GATGGGCGTC GGTGTGATGC CAGAGCGGCC GCAATTCGGG CCCTGTGTCT CTTTTTTATT GATGGCCTGC TGTACGGCCT GGTGGCGTAC CTCAGCATGC AGCCGCCGCT CTATCAACGC GTCGGCGACC GAATAGCGAA GACAGTGGTT GTCAAGCGGC GTGAGTCTCC CTCGCCCCCG CCACCCTTCT GGCGCTTCCT GGTTGCGGCA GCGATCTATC TGATCATCAC AAAAGTAGCG GTCTTCATCG TTGTGCTCGC CTGGACGATC TAG
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Protein sequence | MSSISIAPTY SGVNLAERPS RRRRAGALLI DACIHNAAFL VSFVVVYLPL AIVYYLITGR DPEFISESVA GNLLDYAVSL FSAFTYFIAF ETIYGATPGK WLLGMHVFKS DGRRCDARAA AIRALCLFFI DGLLYGLVAY LSMQPPLYQR VGDRIAKTVV VKRRESPSPP PPFWRFLVAA AIYLIITKVA VFIVVLAWTI
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